RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 PDCP20941 246 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 ITGB8P26012 769 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 SFNP31947 248 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 JAK3P52333 1124 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 AFAP1L1Q8TED9 768 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 NOC4LQ9BVI4 516 aaKnown RBP21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 UNC45AQ9H3U1 944 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 SETD4Q9NVD3 440 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 KAT6AQ92794 2004 aa21.44■■□□□ 1.02
PDLIM7-204ENST00000393546 CYP2C18P33260 490 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 BMP8BP34820 402 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 TRAPPC10P48553 1259 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 ZNF200P98182 395 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 BFSP2Q13515 415 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 CALCRLQ16602 461 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 MFSD5Q6N075 450 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 PDXDC2PQ6P474 469 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 MIER3Q7Z3K6 550 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 CCDC60Q8IWA6 550 aaPredicted RBP21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 TMEM199Q8N511 208 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 CCDC155Q8N6L0 562 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 RETREG2Q8NC44 543 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 RDM1Q8NG50 284 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 HAS1Q92839 578 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 ATP6V0A1Q93050 837 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 UBE2OQ9C0C9 1292 aaKnown RBP21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 NRCAMQ92823 1304 aa21.43■■□□□ 1.02
PDLIM7-204ENST00000393546 NEMFO60524 1076 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 HOXC8P31273 242 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 PPFIA1Q13136 1202 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 PTK7Q13308 1070 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 HIC1Q14526 733 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 PLCB4Q15147 1175 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 CKAP2LQ8IYA6 745 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 FOXD4L1Q9NU39 408 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 GABBR1Q9UBS5 961 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 TRPC6Q9Y210 931 aa21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 COLQQ9Y215 455 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 MAFBQ9Y5Q3 323 aaPredicted RBP21.42■■□□□ 1.02
PDLIM7-204ENST00000393546 TRIP12Q14669 1992 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 POTEB3A0JP26 581 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 RRN3P2A6NIE6 340 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 WNT7AO00755 349 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 MCM7P33993 719 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 FPGSQ05932 587 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 ORC2Q13416 577 aaPredicted RBP21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 ZNF174Q15697 407 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 TTC38Q5R3I4 469 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 POTEBQ6S5H4 581 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 B3GNT9Q6UX72 402 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 CAGE1Q8TC20 777 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 CTAGE1Q96RT6 745 aa21.41■■□□□ 1.02
PDLIM7-204ENST00000393546 MYH9P35579 1960 aaKnown RBP21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 PITPNM1O00562 1244 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 TREHO43280 583 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 HBP1O60381 514 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 INSRRP14616 1297 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 CCL23P55773 120 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 PPP2R5CQ13362 524 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 GRIK4Q16099 956 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 ATP8B4Q8TF62 1192 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 PCDHA12Q9UN75 941 aa21.4■■□□□ 1.02
PDLIM7-204ENST00000393546 LTBP2Q14767 1821 aa21.39■■□□□ 1.02
PDLIM7-204ENST00000393546 UMODL1Q5DID0 1318 aa21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 HSP90AA1P07900 732 aaKnown RBP21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 ADAM17P78536 824 aa21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 PPIGQ13427 754 aaKnown RBP eCLIP21.39■■□□□ 1.019e-7■■■□□ 16.9
PDLIM7-204ENST00000393546 SERINC5Q86VE9 423 aa21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 LMBR1Q8WVP7 490 aa21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 PRO3102Q9H379 93 aa21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 VAV3Q9UKW4 847 aa21.39■■□□□ 1.01
PDLIM7-204ENST00000393546 CSF2RAP15509 400 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 ATP4AP20648 1035 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 TXKP42681 527 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 IGBP1P78318 339 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 BBXQ8WY36 941 aaPredicted RBP21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 DHX38Q92620 1227 aaKnown RBP21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 FAM167AQ96KS9 214 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 MTMR9Q96QG7 549 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 NRBP2Q9NSY0 501 aa21.38■■□□□ 1.01
PDLIM7-204ENST00000393546 VPS37CA5D8V6 355 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 EML1O00423 815 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 IQCF3P0C7M6 154 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 TOB1P50616 345 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 RBL2Q08999 1139 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 EPHA7Q15375 998 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 RILPL1Q5EBL4 403 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 ZNF484Q5JVG2 852 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 NCAPH2Q6IBW4 605 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 RPUSD2Q8IZ73 545 aaKnown RBP21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 WNT8AQ9H1J5 351 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 TMEM60Q9H2L4 133 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 TTC12Q9H892 705 aaPredicted RBP21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 TUBE1Q9UJT0 475 aa21.37■■□□□ 1.01
PDLIM7-204ENST00000393546 IGSF9BQ9UPX0 1349 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 A0A1W2PPC1 479 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 DKC1O60832 514 aaKnown RBP eCLIP21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 CKBP12277 381 aa21.36■■□□□ 1.01
PDLIM7-204ENST00000393546 SELPP16109 830 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms