RNA–Protein interactions for RNA: ENST00000393158.6

PDGFD-202, Transcript of platelet derived growth factor D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDGFD, Length 3,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-202ENST00000393158 MAFGO15525 162 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 RPN1P04843 607 aaKnown RBP12.09□□□□□ -0.47
PDGFD-202ENST00000393158 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 APLP1P51693 650 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 CCL14Q16627 93 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 ARMCX2Q7L311 632 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 LXNQ9BS40 222 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 PKD2L1Q9P0L9 805 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 HOXD8P13378 290 aaPredicted RBP12.09□□□□□ -0.47
PDGFD-202ENST00000393158 ZNF131P52739 623 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 EPHA7Q15375 998 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 RNF214Q8ND24 703 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 DDX12PQ92771 950 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 COPS5Q92905 334 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 LOC102724159A0A0B4J2E5 919 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 GAS7O60861 476 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 CCDC192P0DO97 292 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 COPB2P35606 906 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
PDGFD-202ENST00000393158 STX1AQ16623 288 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 RINT1Q6NUQ1 792 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 TRPV1Q8NER1 839 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 FAM200AQ8TCP9 573 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 PIGOQ8TEQ8 1089 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 CCDC102AQ96A19 550 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 MAGEF1Q9HAY2 307 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 REV3LO60673 3130 aa12.09□□□□□ -0.47
PDGFD-202ENST00000393158 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 CHMP2AO43633 222 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 PLA2G4BP0C869 781 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 ARHGAP1Q07960 439 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 ZCWPW2Q504Y3 356 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 GJC2Q5T442 439 aaPredicted RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 DDX39AO00148 427 aaKnown RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 CA12O43570 354 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 ZNF865P0CJ78 1059 aaPredicted RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 MUTP22033 750 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 PRCPP42785 496 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 INHBEP58166 350 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 IRX5P78411 483 aaPredicted RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 STXBP2Q15833 593 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 ZNF746Q6NUN9 644 aaPredicted RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 TRMT44Q8IYL2 757 aaKnown RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 SMCR8Q8TEV9 937 aaPredicted RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 TBC1D22BQ9NU19 505 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 DIS3Q9Y2L1 958 aaKnown RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 PDCD11Q14690 1871 aaKnown RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 STRNO43815 780 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 MYL1P05976 194 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 CCT6AP40227 531 aaKnown RBP12.08□□□□□ -0.48
PDGFD-202ENST00000393158 ADSSL1Q8N142 457 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 TRIML1Q8N9V2 468 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 REEP2Q9BRK0 252 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 TEKT3Q9BXF9 490 aa12.08□□□□□ -0.48
PDGFD-202ENST00000393158 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 ACTR2P61160 394 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 TMEM266Q2M3C6 531 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 EMID1Q96A84 441 aaPredicted RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 GPR20Q99678 358 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 IKZF4Q9H2S9 585 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 PPP1R37O75864 691 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 EYA4O95677 639 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 RARRES1P49788 294 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 TARBP2Q15633 366 aaKnown RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 KRT79Q5XKE5 535 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 CYFIP1Q7L576 1253 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 CAPNS2Q96L46 248 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 DUSP9Q99956 384 aaKnown RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 SH2D3AQ9BRG2 576 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 POLD4Q9HCU8 107 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 GNEQ9Y223 722 aaKnown RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 KDM3AQ9Y4C1 1321 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 LGR5O75473 907 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 VEGFBP49765 207 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 CACNB1Q02641 598 aaPredicted RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 ZNF658Q5TYW1 1059 aaPredicted RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 KANK3Q6NY19 840 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 C4orf19Q8IY42 314 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 AFAP1L1Q8TED9 768 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 SEMA6BQ9H3T3 888 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 EHMT1Q9H9B1 1298 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 JPH1Q9HDC5 661 aaPredicted RBP12.07□□□□□ -0.48
PDGFD-202ENST00000393158 GABRQQ9UN88 632 aa12.07□□□□□ -0.48
PDGFD-202ENST00000393158 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 ZNF76P36508 570 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 TAF1CQ15572 869 aaPredicted RBP12.06□□□□□ -0.48
PDGFD-202ENST00000393158 CELF3Q5SZQ8 465 aaKnown RBP12.06□□□□□ -0.48
PDGFD-202ENST00000393158 CDKAL1Q5VV42 579 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 EEPD1Q7L9B9 569 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 ZC3H3Q8IXZ2 948 aaKnown RBP12.06□□□□□ -0.48
PDGFD-202ENST00000393158 BHMT2Q9H2M3 363 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 KCTD10Q9H3F6 313 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 ABT1Q9ULW3 272 aaKnown RBP12.06□□□□□ -0.48
PDGFD-202ENST00000393158 RANBP2P49792 3224 aaKnown RBP12.06□□□□□ -0.48
PDGFD-202ENST00000393158 SORBS3O60504 671 aa12.06□□□□□ -0.48
PDGFD-202ENST00000393158 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms