RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 TTYH1Q9H313 450 aaPredicted RBP12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 SEMA6BQ9H3T3 888 aa12.95□□□□□ -0.34
IGHV4-28-201ENST00000390612 UNC80Q8N2C7 3258 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 GRXCR1A8MXD5 290 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 DTNBO60941 627 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 CAND2O75155 1236 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 TCTN1Q2MV58 587 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 FAM26DQ5JW98 314 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 TBCKQ8TEA7 893 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 GUCD1Q96NT3 240 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 MTIF3Q9H2K0 278 aaKnown RBP12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 GJB4Q9NTQ9 266 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 TBC1D22BQ9NU19 505 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 ORC3Q9UBD5 711 aaPredicted RBP12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
IGHV4-28-201ENST00000390612 TTC3P53804 2025 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 MSH4O15457 936 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 DNAJB2P25686 324 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 SLC26A2P50443 739 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 STAT5BP51692 787 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 MKRN4PQ13434 485 aaPredicted RBP12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 PLCB4Q15147 1175 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 Q4G0T1 1027 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 PRR16Q569H4 304 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZNF746Q6NUN9 644 aaPredicted RBP12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 MOXD1Q6UVY6 613 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 B3GNT9Q6UX72 402 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 GLG1Q92896 1179 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 SLC5A5Q92911 643 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZNF577Q9BSK1 485 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 PBX4Q9BYU1 374 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 SLC4A7Q9Y6M7 1214 aa12.93□□□□□ -0.34
IGHV4-28-201ENST00000390612 RRN3P2A6NIE6 340 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 RSPH10B2B2RC85 870 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 BAIAP3O94812 1187 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 RSPH10BP0C881 870 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 ACTN1P12814 892 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 INSRRP14616 1297 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 ATP4AP20648 1035 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 MARK3P27448 753 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 THPOP40225 353 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 PBX2P40425 430 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 PPFIA1Q13136 1202 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 GRIK4Q16099 956 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 CNKSR3Q6P9H4 555 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 KRT25Q7Z3Z0 450 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 CCDC60Q8IWA6 550 aaPredicted RBP12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 PHOSPHO2Q8TCD6 241 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 OXER1Q8TDS5 423 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 TNFRSF25Q93038 417 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 RIT2Q99578 217 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 OSBPL7Q9BZF2 842 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 AZI2Q9H6S1 392 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 STXBP5LQ9Y2K9 1186 aa12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZBTB42B2RXF5 422 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 RBAK-RBAKDNI3L0D1 243 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 JAK2O60674 1132 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 PSMD10O75832 226 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 XBP1P17861 261 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 KRT76Q01546 638 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 NONOQ15233 471 aaKnown RBP eCLIP12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 PLEKHG4Q58EX7 1191 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 TAF2Q6P1X5 1199 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 RUFY4Q6ZNE9 571 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 SMAP1Q8IYB5 467 aaPredicted RBP12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 ETNPPLQ8TBG4 499 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 WASF1Q92558 559 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 UIMC1Q96RL1 719 aa12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 FTOQ9C0B1 505 aaKnown RBP eCLIP12.91□□□□□ -0.34
IGHV4-28-201ENST00000390612 ABHD14A-ACY1A0A1B0GW23 586 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 POTEB3A0JP26 581 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 DDX39AO00148 427 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 HBP1O60381 514 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 TDP2O95551 362 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 CHRNA1P02708 482 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 MGAT3Q09327 533 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 RAB30Q15771 203 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 INF2Q27J81 1249 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 EARS2Q5JPH6 523 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 PPP4R3AQ6IN85 833 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 SWSAP1Q6NVH7 229 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 MIS18BP1Q6P0N0 1132 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 POTEBQ6S5H4 581 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 ATP8B4Q8TF62 1192 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 TNPO1Q92973 898 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 TIFAQ96CG3 184 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 SLC9A7Q96T83 725 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 LLPHQ9BRT6 129 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZNF576Q9H609 170 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 TUBE1Q9UJT0 475 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 YBX2Q9Y2T7 364 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 PCDHA2Q9Y5H9 948 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 PCDHA11Q9Y5I1 949 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 PRRC2BQ5JSZ5 2229 aaKnown RBP12.9□□□□□ -0.34
IGHV4-28-201ENST00000390612 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms