RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 CDCA5Q96FF9 252 aa8.48□□□□□ -1.05
TRBV28-201ENST00000390400 DYNLL2Q96FJ2 89 aa8.48□□□□□ -1.05
TRBV28-201ENST00000390400 GLIS2Q9BZE0 524 aaPredicted RBP8.48□□□□□ -1.05
TRBV28-201ENST00000390400 MKNK2Q9HBH9 465 aa8.48□□□□□ -1.05
TRBV28-201ENST00000390400 SWAP70Q9UH65 585 aa8.48□□□□□ -1.05
TRBV28-201ENST00000390400 HERC5Q9UII4 1024 aaKnown RBP8.48□□□□□ -1.05
TRBV28-201ENST00000390400 E7EWF7 191 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 SMIM22K7EJ46 135 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 TUBBP07437 444 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 CDK8P49336 464 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 NEK4P51957 841 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 GABPAQ06546 454 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 PKP1Q13835 747 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 NBPF12Q5TAG4 269 aaPredicted RBP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 CEP135Q66GS9 1140 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 RALYLQ86SE5 291 aaKnown RBP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 SLC44A5Q8NCS7 719 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 FBXO27Q8NI29 283 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 STK35Q8TDR2 534 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 JAKMIP1Q96N16 626 aaKnown RBP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 POP1Q99575 1024 aaKnown RBP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 TM6SF1Q9BZW5 370 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 KRT23Q9C075 422 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 SCAND2PQ9GZW5 306 aaPredicted RBP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 FAM107BQ9H098 131 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 KCNF1Q9H3M0 494 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 ZNF576Q9H609 170 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 CNNM2Q9H8M5 875 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 ZNF408Q9H9D4 720 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 TOMM22Q9NS69 142 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.47□□□□□ -1.05
TRBV28-201ENST00000390400 PCDHB5Q9Y5E4 795 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 SNX14Q9Y5W7 946 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 MRVI1Q9Y6F6 885 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 TAF6LQ9Y6J9 622 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 NEDD4P46934 1319 aa8.47□□□□□ -1.05
TRBV28-201ENST00000390400 NRG2O14511 850 aaPredicted RBP8.46□□□□□ -1.06
TRBV28-201ENST00000390400 RANBP6O60518 1105 aaKnown RBP8.46□□□□□ -1.06
TRBV28-201ENST00000390400 RPS6KA5O75582 802 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 PRDM1O75626 825 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 STK10O94804 968 aaKnown RBP8.46□□□□□ -1.06
TRBV28-201ENST00000390400 F13A1P00488 732 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 HMGB1P09429 215 aaKnown RBP8.46□□□□□ -1.06
TRBV28-201ENST00000390400 XRCC5P13010 732 aaKnown RBP8.46□□□□□ -1.06
TRBV28-201ENST00000390400 PSMA5P28066 241 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 SHMT1P34896 483 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 NT5C2P49902 561 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 NRLP54845 237 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 CAMK2GQ13555 558 aaPredicted RBP8.46□□□□□ -1.06
TRBV28-201ENST00000390400 ATL3Q6DD88 541 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 STOX1Q6ZVD7 989 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 MIGA2Q7L4E1 593 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 SMC1BQ8NDV3 1235 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 NCOA7Q8NI08 942 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 ESR2Q92731 530 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF341Q9BYN7 854 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 PBX4Q9BYU1 374 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 ZSWIM4Q9H7M6 989 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 DNAJC18Q9H819 358 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 KLF15Q9UIH9 416 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 TACC3Q9Y6A5 838 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 SSC5DA1L4H1 1573 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 TRPM7Q96QT4 1865 aa8.46□□□□□ -1.06
TRBV28-201ENST00000390400 B4E1Z4 1266 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 PDE2AO00408 941 aaPredicted RBP8.45□□□□□ -1.06
TRBV28-201ENST00000390400 TRAF5O00463 557 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 STX6O43752 255 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 SLURP2P0DP57 97 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 CASTP20810 708 aaKnown RBP8.45□□□□□ -1.06
TRBV28-201ENST00000390400 FGFR3P22607 806 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 SOX9P48436 509 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 GPLD1P80108 840 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 SERINC3Q13530 473 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 PTPN14Q15678 1187 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 ADCK5Q3MIX3 580 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 CERKLQ49MI3 558 aaPredicted RBP8.45□□□□□ -1.06
TRBV28-201ENST00000390400 TTBK2Q6IQ55 1244 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 TATDN1Q6P1N9 297 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 BLOC1S2Q6QNY1 142 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 DLK2Q6UY11 383 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 FCHSD1Q86WN1 690 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 ZNF444Q8N0Y2 327 aaPredicted RBP8.45□□□□□ -1.06
TRBV28-201ENST00000390400 GOLM1Q8NBJ4 401 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 GOLGA5Q8TBA6 731 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 EXOC4Q96A65 974 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 PLD4Q96BZ4 506 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 CHMP4CQ96CF2 233 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 SEC16BQ96JE7 1060 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 CCDC17Q96LX7 622 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 NEK1Q96PY6 1258 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 NT5C1AQ9BXI3 368 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 NUP62CLQ9H1M0 184 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 INCENPQ9NQS7 918 aa8.45□□□□□ -1.06
TRBV28-201ENST00000390400 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.45□□□□□ -1.06
TRBV28-201ENST00000390400 FEZ2Q9UHY8 353 aaPredicted RBP8.45□□□□□ -1.06
TRBV28-201ENST00000390400 PAPPA2Q9BXP8 1791 aa8.44□□□□□ -1.06
TRBV28-201ENST00000390400 GOLGA6L9A6NEM1 432 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms