RNA–Protein interactions for RNA: ENST00000389995.4

SOD1-202, Transcript of superoxide dismutase 1, humanhuman

TSL 3 BASIC

Gene SOD1, Length 865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-202ENST00000389995 RWDD3Q9Y3V2 267 aa13.69□□□□□ -0.22
SOD1-202ENST00000389995 KLRF2D3W0D1 207 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 PER2O15055 1255 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 SP100P23497 879 aaPredicted RBP13.68□□□□□ -0.22
SOD1-202ENST00000389995 PDE1AP54750 535 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 MGAT3Q09327 533 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 COASYQ13057 564 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 RTN4RL1Q86UN2 441 aaPredicted RBP13.68□□□□□ -0.22
SOD1-202ENST00000389995 POF1BQ8WVV4 589 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 DNAJB3Q8WWF6 145 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 AGO3Q9H9G7 860 aaKnown RBP13.68□□□□□ -0.22
SOD1-202ENST00000389995 GVINP1Q7Z2Y8 2422 aa13.68□□□□□ -0.22
SOD1-202ENST00000389995 GCOM1H8Y6P7 765 aaPredicted RBP13.67□□□□□ -0.22
SOD1-202ENST00000389995 ZBTB5O15062 677 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 POLR2MP0CAP2 368 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 MARK3P27448 753 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 AVPR2P30518 371 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 CD52P31358 61 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 SIGLEC14Q08ET2 396 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 CBX2Q14781 532 aaPredicted RBP13.67□□□□□ -0.22
SOD1-202ENST00000389995 FBXO47Q5MNV8 452 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 METTL7BQ6UX53 244 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 VN1R2Q8NFZ6 395 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 RILPL2Q969X0 211 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 MTMR8Q96EF0 704 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 PIGSQ96S52 555 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 PRRX2Q99811 253 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 PLVAPQ9BX97 442 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 MAD2L2Q9UI95 211 aa13.67□□□□□ -0.22
SOD1-202ENST00000389995 SPATA31C2B4DYI2 1134 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 TMEM62Q0P6H9 643 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 ASCL5Q7RTU5 278 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 PIBF1Q8WXW3 757 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 P2RX5Q93086 422 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 APOL5Q9BWW9 433 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 PHF7Q9BWX1 381 aaPredicted RBP13.66□□□□□ -0.22
SOD1-202ENST00000389995 ZNF215Q9UL58 517 aaPredicted RBP13.66□□□□□ -0.22
SOD1-202ENST00000389995 CDY2AQ9Y6F7 541 aa13.66□□□□□ -0.22
SOD1-202ENST00000389995 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
SOD1-202ENST00000389995 ICAM3P32942 547 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 IGBP1P78318 339 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 NEDD9Q14511 834 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 PKN1Q16512 942 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 GNPTABQ3T906 1256 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 CCDC178Q5BJE1 867 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 IFIT1BQ5T764 474 aaKnown RBP13.65□□□□□ -0.22
SOD1-202ENST00000389995 CRIPAKQ8N1N5 446 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 PPP2R3CQ969Q6 453 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 INPP4AQ96PE3 977 aaPredicted RBP13.65□□□□□ -0.22
SOD1-202ENST00000389995 FAM49AQ9H0Q0 323 aaPredicted RBP13.65□□□□□ -0.22
SOD1-202ENST00000389995 TLE6Q9H808 572 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 MAP3K20Q9NYL2 800 aaKnown RBP13.65□□□□□ -0.22
SOD1-202ENST00000389995 HCSTQ9UBK5 93 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 CDH22Q9UJ99 828 aa13.65□□□□□ -0.22
SOD1-202ENST00000389995 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 TCF7P36402 384 aaPredicted RBP13.64□□□□□ -0.23
SOD1-202ENST00000389995 PPFIA1Q13136 1202 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 GRIK4Q16099 956 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 MARCH8Q5T0T0 291 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 TSHZ1Q6ZSZ6 1077 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 CMTR2Q8IYT2 770 aaKnown RBP13.64□□□□□ -0.23
SOD1-202ENST00000389995 MICAL1Q8TDZ2 1067 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 UBAC1Q9BSL1 405 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 ZBTB47Q9UFB7 747 aaPredicted RBP13.64□□□□□ -0.23
SOD1-202ENST00000389995 TUBE1Q9UJT0 475 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 DNAH14Q0VDD8 3507 aa13.64□□□□□ -0.23
SOD1-202ENST00000389995 EP300Q09472 2414 aaPredicted RBP13.63□□□□□ -0.23
SOD1-202ENST00000389995 PALM3A6NDB9 673 aaPredicted RBP13.63□□□□□ -0.23
SOD1-202ENST00000389995 FIBPO43427 364 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 CYTH3O43739 400 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 ATP9AO75110 1047 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 SDSP20132 328 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 ERVFC1P60507 584 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 MRPS6P82932 125 aaKnown RBP13.63□□□□□ -0.23
SOD1-202ENST00000389995 SEC23AQ15436 765 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 PTPN21Q16825 1174 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 TPRNQ4KMQ1 711 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 TAF2Q6P1X5 1199 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 CWC27Q6UX04 472 aaKnown RBP13.63□□□□□ -0.23
SOD1-202ENST00000389995 CYB5R4Q7L1T6 521 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 SUSD6Q92537 303 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 SMOC2Q9H3U7 446 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 SENP2Q9HC62 589 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 PKD2L1Q9P0L9 805 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 FRMPD4Q14CM0 1322 aa13.63□□□□□ -0.23
SOD1-202ENST00000389995 GSTTP1A0A1W2PQM5 241 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 TMEM266Q2M3C6 531 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 NAALADL2Q58DX5 795 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 LLGL2Q6P1M3 1020 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 ZBTB33Q86T24 672 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 RSPH3Q86UC2 560 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 NPAS4Q8IUM7 802 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 ATP8B4Q8TF62 1192 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 PADI3Q9ULW8 664 aa13.62□□□□□ -0.23
SOD1-202ENST00000389995 MYH9P35579 1960 aaKnown RBP13.62□□□□□ -0.23
SOD1-202ENST00000389995 WDR81Q562E7 1941 aa13.61□□□□□ -0.23
SOD1-202ENST00000389995 SCG2P13521 617 aa13.61□□□□□ -0.23
SOD1-202ENST00000389995 MFAP1P55081 439 aaKnown RBP13.61□□□□□ -0.23
SOD1-202ENST00000389995 APOBRQ0VD83 1088 aa13.61□□□□□ -0.23
SOD1-202ENST00000389995 DUSP6Q16828 381 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms