RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 B4E1Z4 1266 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 ZNF213O14771 459 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 PPP1R11O60927 126 aaPredicted RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 PCP11498 1178 aaKnown RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 MARK3P27448 753 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 NBL1P41271 181 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 NUBP1P53384 320 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 PPFIA1Q13136 1202 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 FBXO47Q5MNV8 452 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 TAF2Q6P1X5 1199 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 METTL7BQ6UX53 244 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 ZNF589Q86UQ0 364 aaPredicted RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 TMEM105Q8N8V8 129 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 VN1R2Q8NFZ6 395 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 LINC01599Q8WXQ3 324 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 SUSD6Q92537 303 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 NKD2Q969F2 451 aaPredicted RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 ZSCAN10Q96SZ4 725 aaPredicted RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 MFSD1Q9H3U5 465 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 AGO3Q9H9G7 860 aaKnown RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 MAP3K20Q9NYL2 800 aaKnown RBP11.17□□□□□ -0.62
IFT88-203ENST00000389373 PCDHB12Q9Y5F1 795 aa11.17□□□□□ -0.62
IFT88-203ENST00000389373 KLRF2D3W0D1 207 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 SRGAP2BP0DMP2 458 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 ERVFC1P60507 584 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 MRPS9P82933 396 aaKnown RBP11.16□□□□□ -0.62
IFT88-203ENST00000389373 NMIQ13287 307 aaPredicted RBP11.16□□□□□ -0.62
IFT88-203ENST00000389373 GRIK4Q16099 956 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 PLPP4Q5VZY2 271 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 THNSL1Q8IYQ7 743 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 ATP8B4Q8TF62 1192 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 ZBTB10Q96DT7 871 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 FAM49AQ9H0Q0 323 aaPredicted RBP11.16□□□□□ -0.62
IFT88-203ENST00000389373 TMEM260Q9NX78 707 aa11.16□□□□□ -0.62
IFT88-203ENST00000389373 PLXNA3P51805 1871 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 SPATA31C2B4DYI2 1134 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 ZBTB5O15062 677 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 FIBPO43427 364 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 BRD1O95696 1058 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 SCG2P13521 617 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 TCF7P36402 384 aaPredicted RBP11.15□□□□□ -0.62
IFT88-203ENST00000389373 MRPS6P82932 125 aaKnown RBP11.15□□□□□ -0.62
IFT88-203ENST00000389373 C1QBPQ07021 282 aaKnown RBP11.15□□□□□ -0.62
IFT88-203ENST00000389373 TMEM62Q0P6H9 643 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 APOBRQ0VD83 1088 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 SEMA3FQ13275 785 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 DUSP6Q16828 381 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 ANKRD54Q6NXT1 300 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 SAMD3Q8N6K7 520 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 ENAHQ8N8S7 591 aaPredicted RBP11.15□□□□□ -0.62
IFT88-203ENST00000389373 PIBF1Q8WXW3 757 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 RILPL2Q969X0 211 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 CDCA3Q99618 268 aaPredicted RBP11.15□□□□□ -0.62
IFT88-203ENST00000389373 S1PR5Q9H228 398 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 SMOC2Q9H3U7 446 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 AAASQ9NRG9 546 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 CDH22Q9UJ99 828 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 TUBE1Q9UJT0 475 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 RCAN3Q9UKA8 241 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 NR2E1Q9Y466 385 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 PCDHB7Q9Y5E2 793 aa11.15□□□□□ -0.62
IFT88-203ENST00000389373 USP34Q70CQ2 3546 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 TBKBP1A7MCY6 615 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 M0QZ92 97 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 FGF18O76093 207 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 GHRHRQ02643 423 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 NFX1Q12986 1120 aaKnown RBP11.14□□□□□ -0.63
IFT88-203ENST00000389373 PAK2Q13177 524 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 MTMR3Q13615 1198 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 TMEM266Q2M3C6 531 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 IFIT1BQ5T764 474 aaKnown RBP11.14□□□□□ -0.63
IFT88-203ENST00000389373 ANKRD45Q5TZF3 282 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 IER5Q5VY09 327 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 ASTLQ6HA08 431 aaPredicted RBP11.14□□□□□ -0.63
IFT88-203ENST00000389373 UBALD2Q8IYN6 164 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 FLCNQ8NFG4 579 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 KCNG4Q8TDN1 519 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 GLG1Q92896 1179 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 PIGSQ96S52 555 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 UBAC1Q9BSL1 405 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 FTHL17Q9BXU8 183 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 ZSWIM5Q9P217 1185 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 PADI3Q9ULW8 664 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 SORCS3Q9UPU3 1222 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 TRPV2Q9Y5S1 764 aa11.14□□□□□ -0.63
IFT88-203ENST00000389373 ZMYM6O95789 1325 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 FSD2A1L4K1 749 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 C2CD4DB7Z1M9 353 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 STAM2O75886 525 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 ASGR2P07307 311 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 CA8P35219 290 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 UBE3AQ05086 875 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 MARCH8Q5T0T0 291 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 MCTP2Q6DN12 878 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 SYCE2Q6PIF2 218 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 INPP4AQ96PE3 977 aaPredicted RBP11.13□□□□□ -0.63
IFT88-203ENST00000389373 ENTPD7Q9NQZ7 604 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 PKD2L1Q9P0L9 805 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 HCSTQ9UBK5 93 aa11.13□□□□□ -0.63
IFT88-203ENST00000389373 TRIOO75962 3097 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms