RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 GPATCH4Q5T3I0 446 aaKnown RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 SWAP70Q9UH65 585 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 PACSIN2Q9UNF0 486 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 CAPN7Q9Y6W3 813 aa12.87□□□□□ -0.35
RAPGEF3-201ENST00000389212 TLR2O60603 784 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 EIF3JO75822 258 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CYP11B2P19099 503 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 FKBP3Q00688 224 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 RAPGEF1Q13905 1077 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CERKLQ49MI3 558 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 SH3BP5LQ7L8J4 393 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CREG2Q8IUH2 290 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 SCFD1Q8WVM8 642 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 LRRC1Q9BTT6 524 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 BMP2KQ9NSY1 1161 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 DMGDHQ9UI17 866 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 SNX12Q9UMY4 172 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 UBR3Q6ZT12 1888 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 NOL4O94818 638 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 FGFR1OPO95684 399 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CCT5P48643 541 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 JAG1P78504 1218 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 ORC2Q13416 577 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 ZCWPW2Q504Y3 356 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 COBLL1Q53SF7 1204 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 WDR93Q6P2C0 686 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CCDC84Q86UT8 332 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 GBP3Q9H0R5 595 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CD248Q9HCU0 757 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 ATF5Q9Y2D1 282 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 TTC36A6NLP5 189 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 RSPH10B2B2RC85 870 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 RSPH10BP0C881 870 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 CKAP4Q07065 602 aaKnown RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 ACTN3Q08043 901 aaPredicted RBP12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 ARSHQ5FYA8 562 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 FAM83BQ5T0W9 1011 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 HGSNATQ68CP4 663 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 PACSIN1Q9BY11 444 aa12.86□□□□□ -0.35
RAPGEF3-201ENST00000389212 ENO4A6NNW6 628 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 MEIS2O14770 477 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 FTCDO95954 541 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 SIAH1Q8IUQ4 282 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 FAM133AQ8N9E0 248 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 TRIM58Q8NG06 486 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 OSBPL9Q96SU4 736 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 EMILIN3Q9NT22 766 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 SPATS2LQ9NUQ6 558 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 FAM198AQ9UFP1 575 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 MYH4Q9Y623 1939 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 SFI1A8K8P3 1242 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 HNRNPH3P31942 346 aaKnown RBP12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 INPP5BP32019 993 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 CDK17Q00537 523 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 ICA1Q05084 483 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 ADAM9Q13443 819 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 CATSPER3Q86XQ3 398 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 CCDC65Q8IXS2 484 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 TBC1D5Q92609 795 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 GOLPH3Q9H4A6 298 aa12.85□□□□□ -0.35
RAPGEF3-201ENST00000389212 SMCHD1A6NHR9 2005 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 PRPF6O94906 941 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 MMP10P09238 476 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 UBXN2AP68543 259 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 ARHGAP4P98171 946 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 SNX1Q13596 522 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 PPP1R18Q6NYC8 613 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 COL23A1Q86Y22 540 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 TSGA10Q9BZW7 698 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 PICK1Q9NRD5 415 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 PCDHA2Q9Y5H9 948 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 FAM86B1E9PN63 330 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 EBAG9O00559 213 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 FAM86B2P0C5J1 330 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 GBP2P32456 591 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 EPS15P42566 896 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 SFMBT2Q5VUG0 894 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 ZNF662Q6ZS27 426 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 SFR1Q86XK3 245 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 SELENOOQ9BVL4 669 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 TDRD3Q9H7E2 651 aaKnown RBP12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 FAM204AQ9H8W3 233 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 HPCAL4Q9UM19 191 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 KLRG2A4D1S0 409 aaPredicted RBP12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 F5H6K3 240 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 RNF40O75150 1001 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 MYBP10242 640 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 NR2F2P24468 414 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 KLRC3Q07444 240 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 KCNA1Q09470 495 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 CCDC181Q5TID7 509 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 SPATA4Q8NEY3 305 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 ZBTB10Q96DT7 871 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 RGL1Q9NZL6 768 aa12.84□□□□□ -0.35
RAPGEF3-201ENST00000389212 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms