RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 FAM89AQ96GI7 184 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 MYO5CQ9NQX4 1742 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 SCG2P13521 617 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 PCDHGB4Q9UN71 923 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 PRR23D1E9PI22 279 aaPredicted RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 PRR23D2P0DMB1 279 aaPredicted RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 SCNN1DP51172 638 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 SGO2Q562F6 1265 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 DSTYKQ6XUX3 929 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 ARHGEF25Q86VW2 580 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 MRPL50Q8N5N7 158 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 AFG1LQ8WV93 481 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 ATG3Q9NT62 314 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 FSCBQ5H9T9 825 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 GPATCH4Q5T3I0 446 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 TEDDM1Q5T9Z0 273 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 TCP11Q8WWU5 503 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 TADA1Q96BN2 335 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 TFAP4Q01664 338 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 IP6K1Q92551 441 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 ZNF75DP51815 510 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 GJA10Q969M2 543 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 GOLGA8JA6NMD2 632 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 ADAM9Q13443 819 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 KLC2Q9H0B6 622 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 MAP3K20Q9NYL2 800 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 MAP4P27816 1152 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 KRT72Q14CN4 511 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 CAPS2Q9BXY5 557 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 ZSCAN9O15535 394 aaPredicted RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 COBLO75128 1261 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 OAS2P29728 719 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 GUCA1AP43080 201 aaPredicted RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 C7orf31Q8N865 590 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 HADHAP40939 763 aa12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 BASP1P80723 227 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 NCOA5Q9HCD5 579 aaKnown RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 MAGED2Q9UNF1 606 aaPredicted RBP12.04□□□□□ -0.48
PTCHD1-201ENST00000379361 PPEF1O14829 653 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 RASSF7Q02833 373 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 HEXIM2Q96MH2 286 aaKnown RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 C14orf93Q9H972 538 aaKnown RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 HDAC4P56524 1084 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 SLMAPQ14BN4 828 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 BTN2A2Q8WVV5 523 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 TMEM232C9JQI7 657 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 DYNLT1P63172 113 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 THEMIS2Q5TEJ8 643 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 ACAP3Q96P50 834 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 ECT2Q9H8V3 914 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 TTLL1O95922 423 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 H2AFZP0C0S5 128 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 GNGT1P63211 74 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 CC2D1AQ6P1N0 951 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 H2AFVQ71UI9 128 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 PNMA1Q8ND90 353 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 AARSP49588 968 aaKnown RBP eCLIP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 STRIP2Q9ULQ0 834 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 PLS3P13797 630 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 PALMDQ9NP74 551 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 PLXNC1O60486 1568 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 ZFXP17010 805 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 COA7Q96BR5 231 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 SERPINB10P48595 397 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 PPARDQ03181 441 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 TMEM106CQ9BVX2 250 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 LRRC23Q53EV4 343 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 STXBP2Q15833 593 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 C16orf62Q7Z3J2 963 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 YIPF2Q9BWQ6 316 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 OCA2Q04671 838 aa12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 ZNF772Q68DY9 489 aaPredicted RBP12.03□□□□□ -0.48
PTCHD1-201ENST00000379361 RLBP1P12271 317 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 PSMA2P25787 234 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 LARP4BQ92615 738 aaKnown RBP12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 WDR11Q9BZH6 1224 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 NFU1Q9UMS0 254 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 PCDHA5Q9Y5H7 936 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 ECEL1O95672 775 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 MFSD14CQ5VZR4 134 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 TOPORSQ9NS56 1045 aaPredicted RBP12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 MYCP01106 439 aaPredicted RBP12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 PSMC2P35998 433 aaKnown RBP12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 PTGDRQ13258 359 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 GRAMD4Q6IC98 578 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 SH3TC2Q8TF17 1288 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 CALN1Q9BXU9 219 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 KLRF2D3W0D1 207 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 NCF2P19878 526 aaPredicted RBP12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 C2orf69Q8N8R5 385 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 OSBPL10Q9BXB5 764 aa12.02□□□□□ -0.48
PTCHD1-201ENST00000379361 ARAP1Q96P48 1450 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 SUPT3HB4E1H0 165 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 ORC4O43929 436 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 BTDP43251 543 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 COPS2P61201 443 aa12.02□□□□□ -0.49
PTCHD1-201ENST00000379361 RC3H1Q5TC82 1133 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms