RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 NSRP1Q9H0G5 558 aaKnown RBP23.09■■□□□ 1.29
SKI-201ENST00000378536 GOLGA8IPA6NC78 632 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 ZNF233A6NK53 670 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 GOLGA8JA6NMD2 632 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 RPF1Q9H9Y2 349 aaKnown RBP23.09■■□□□ 1.29
SKI-201ENST00000378536 MED1Q15648 1581 aaPredicted RBP23.09■■□□□ 1.29
SKI-201ENST00000378536 SALL1Q9NSC2 1324 aa23.09■■□□□ 1.29
SKI-201ENST00000378536 LDHAP00338 332 aaKnown RBP23.08■■□□□ 1.29
SKI-201ENST00000378536 GNAT1P11488 350 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 KRT31Q15323 416 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 WHAMMP3Q1A5X7 153 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 MMP14P50281 582 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 GOLGA8FQ08AF8 430 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 GOLGA8DPQ0D2H9 430 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 MTRQ99707 1265 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.08■■□□□ 1.29
SKI-201ENST00000378536 PDIA5Q14554 519 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 SCYL2Q6P3W7 929 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 GINM1Q9NU53 330 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 FBXO2Q9UK22 296 aaPredicted RBP23.08■■□□□ 1.29
SKI-201ENST00000378536 PHLPP2Q6ZVD8 1323 aa23.08■■□□□ 1.29
SKI-201ENST00000378536 THAP12O43422 761 aa23.08■■□□□ 1.28
SKI-201ENST00000378536 RASSF7Q02833 373 aa23.08■■□□□ 1.28
SKI-201ENST00000378536 PNMA8AQ86V59 439 aaPredicted RBP23.08■■□□□ 1.28
SKI-201ENST00000378536 JMJD4Q9H9V9 463 aa23.08■■□□□ 1.28
SKI-201ENST00000378536 UBE2TQ9NPD8 197 aaPredicted RBP23.08■■□□□ 1.28
SKI-201ENST00000378536 MON2Q7Z3U7 1717 aa23.08■■□□□ 1.28
SKI-201ENST00000378536 LRRN2O75325 713 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 DDR1Q08345 913 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 CLEC17AQ6ZS10 378 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 FEZ2Q9UHY8 353 aaPredicted RBP23.07■■□□□ 1.28
SKI-201ENST00000378536 LRFN2Q9ULH4 789 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 SPDYE2BA6NHP3 402 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 PRR29P0C7W0 189 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 SPDYE6P0CI01 402 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 KRT81Q14533 505 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 EPHA7Q15375 998 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 RRAGDQ9NQL2 400 aaPredicted RBP23.07■■□□□ 1.28
SKI-201ENST00000378536 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 GTF2F1P35269 517 aaKnown RBP eCLIP23.07■■□□□ 1.283e-7■■■■□ 22
SKI-201ENST00000378536 ZBED6P86452 979 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 PROM2Q8N271 834 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 SPATA33Q96N06 139 aa23.07■■□□□ 1.28
SKI-201ENST00000378536 INTS8Q75QN2 995 aaKnown RBP23.07■■□□□ 1.28
SKI-201ENST00000378536 NSMCE1Q8WV22 266 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 ATP1A3P13637 1013 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 ETF1P62495 437 aaKnown RBP23.06■■□□□ 1.28
SKI-201ENST00000378536 NFIAQ12857 509 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 KCNV1Q6PIU1 500 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 ARFGAP2Q8N6H7 521 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 CCDC94Q9BW85 323 aaPredicted RBP23.06■■□□□ 1.28
SKI-201ENST00000378536 SLC9A2Q9UBY0 812 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 NDC80O14777 642 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 MRPS9P82933 396 aaKnown RBP23.06■■□□□ 1.28
SKI-201ENST00000378536 FAM133AQ8N9E0 248 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 TRIM11Q96F44 468 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 SNX25Q9H3E2 840 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 PCDHA10Q9Y5I2 948 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 SLIT3O75094 1523 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 FAM205CA6NFA0 338 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 MYO1EQ12965 1108 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 BAATQ14032 418 aaPredicted RBP23.06■■□□□ 1.28
SKI-201ENST00000378536 CATSPER4Q7RTX7 472 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 ADGRA1Q86SQ6 560 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 MB21D1Q8N884 522 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 MAD2L2Q9UI95 211 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 HPS5Q9UPZ3 1129 aa23.06■■□□□ 1.28
SKI-201ENST00000378536 PRCPP42785 496 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 SND1Q7KZF4 910 aaKnown RBP eCLIP23.05■■□□□ 1.28
SKI-201ENST00000378536 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.05■■□□□ 1.28
SKI-201ENST00000378536 KCNB2Q92953 911 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 SEL1LQ9UBV2 794 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 CCDC89Q8N998 374 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 MAPK6Q16659 721 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 ANKRD13CQ8N6S4 541 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 TCP1P17987 556 aaKnown RBP23.05■■□□□ 1.28
SKI-201ENST00000378536 METTL23Q86XA0 190 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 SCYL3Q8IZE3 742 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 NXF1Q9UBU9 619 aaKnown RBP23.05■■□□□ 1.28
SKI-201ENST00000378536 STAMBPO95630 424 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 PHKA2P46019 1235 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 PAK2Q13177 524 aa23.05■■□□□ 1.28
SKI-201ENST00000378536 GFPT2O94808 682 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 FDPSP14324 419 aaKnown RBP23.04■■□□□ 1.28
SKI-201ENST00000378536 HOXD10P28358 340 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 ELF2Q15723 593 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 PPP1R21Q6ZMI0 780 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 BPIFA3Q9BQP9 254 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 TUFT1Q9NNX1 390 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 SLC16A4O15374 487 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 NR3C1P04150 777 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 ANKRD13AQ8IZ07 590 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 PSPC1Q8WXF1 523 aaKnown RBP23.04■■□□□ 1.28
SKI-201ENST00000378536 TRIM49BA6NDI0 452 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 RNASELQ05823 741 aaKnown RBP23.04■■□□□ 1.28
SKI-201ENST00000378536 JPH1Q9HDC5 661 aaPredicted RBP23.04■■□□□ 1.28
SKI-201ENST00000378536 RNF8O76064 485 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 CTDNEP1O95476 244 aa23.04■■□□□ 1.28
SKI-201ENST00000378536 MYCP01106 439 aaPredicted RBP23.04■■□□□ 1.28
SKI-201ENST00000378536 PTPROQ16827 1216 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms