RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 FAM83BQ5T0W9 1011 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 CCDC84Q86UT8 332 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-202ENST00000376659 C2CD5Q86YS7 1000 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 KCTD17Q8N5Z5 321 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 HDAC7Q8WUI4 952 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 PRMT6Q96LA8 375 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-202ENST00000376659 SH3GL2Q99962 352 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 DICER1Q9UPY3 1922 aaKnown RBP10.6□□□□□ -0.71
TRIM39-202ENST00000376659 GDF11O95390 407 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 PRKCIP41743 596 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 CACNB1Q02641 598 aaPredicted RBP10.6□□□□□ -0.71
TRIM39-202ENST00000376659 AOC3Q16853 763 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 C1orf186Q6ZWK4 172 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.6□□□□□ -0.71
TRIM39-202ENST00000376659 OTOP1Q7RTM1 612 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 GPBP1Q86WP2 473 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 KIAA0825Q8IV33 1275 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 OSBPL9Q96SU4 736 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 PDE11AQ9HCR9 933 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 PRR12Q9ULL5 1215 aa10.6□□□□□ -0.71
TRIM39-202ENST00000376659 RHOXF2BP0C7M4 288 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 NAB2Q15742 525 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 MCTP2Q6DN12 878 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 CDAN1Q8IWY9 1227 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 SLC30A5Q8TAD4 765 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 FAM20AQ96MK3 541 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 INPP4AQ96PE3 977 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-202ENST00000376659 RHOXF2Q9BQY4 288 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 IFIH1Q9BYX4 1025 aaKnown RBP10.59□□□□□ -0.71
TRIM39-202ENST00000376659 DMAC2Q9NW81 257 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 STXBP5LQ9Y2K9 1186 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 SLC16A3O15427 465 aaKnown RBP10.59□□□□□ -0.71
TRIM39-202ENST00000376659 AKAP3O75969 853 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 ECHS1P30084 290 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 ECE1P42892 770 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 C2orf54Q08AI8 447 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 MAPK7Q13164 816 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 MEI1Q5TIA1 1274 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 MEX3CQ5U5Q3 659 aaKnown RBP10.59□□□□□ -0.71
TRIM39-202ENST00000376659 NFRKBQ6P4R8 1299 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 CCNI2Q6ZMN8 369 aaPredicted RBP10.59□□□□□ -0.71
TRIM39-202ENST00000376659 HDXQ7Z353 690 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 FRMD5Q7Z6J6 570 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 TRIM58Q8NG06 486 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 RASSF8Q8NHQ8 419 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 AMNQ9BXJ7 453 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 IKZF4Q9H2S9 585 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 TMX2Q9Y320 296 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 SPDYE2BA6NHP3 402 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 SLITRK3O94933 977 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 GNA14O95837 355 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 SERPING1P05155 500 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 VIL1P09327 827 aaKnown RBP10.59□□□□□ -0.71
TRIM39-202ENST00000376659 SPDYE6P0CI01 402 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 KCNA1Q09470 495 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 TCP10Q12799 353 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 CCDC96Q2M329 555 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 MUM1L1Q5H9M0 696 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 FKBP15Q5T1M5 1219 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 TAF3Q5VWG9 929 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 MTMR14Q8NCE2 650 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 EMILIN3Q9NT22 766 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 EHD2Q9NZN4 543 aa10.59□□□□□ -0.71
TRIM39-202ENST00000376659 CES2O00748 559 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 SHOX2O60902 331 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-202ENST00000376659 PON1P27169 355 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 GYS2P54840 703 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 SLC18A3Q16572 532 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 ABCB5Q2M3G0 1257 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 RRAGAQ7L523 313 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 SLFN11Q7Z7L1 901 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 RNF10Q8N5U6 811 aaKnown RBP10.58□□□□□ -0.72
TRIM39-202ENST00000376659 SLC35C1Q96A29 364 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 PACSIN1Q9BY11 444 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 ANK1P16157 1881 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 GRID2IPA4D2P6 1211 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 TULP2O00295 520 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 PDXKO00764 312 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 TBC1D12O60347 775 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 TUBBP07437 444 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 HSD17B4P51659 736 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 ZNF571Q7Z3V5 609 aaPredicted RBP10.58□□□□□ -0.72
TRIM39-202ENST00000376659 SFR1Q86XK3 245 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 DAW1Q8N136 415 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 LMO3Q8TAP4 145 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 CCDC47Q96A33 483 aaKnown RBP10.58□□□□□ -0.72
TRIM39-202ENST00000376659 EXOC4Q96A65 974 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 SMARCAL1Q9NZC9 954 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 FAM184BQ9ULE4 1060 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 A0A087X0T9 212 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 EIF3DO15371 548 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRIM39-202ENST00000376659 NCK2O43639 380 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 EYA4O95677 639 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 GH2P01242 217 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 FAM228BP0C875 321 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 CHRNA5P30532 468 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 KNOP1Q1ED39 458 aaKnown RBP10.58□□□□□ -0.72
TRIM39-202ENST00000376659 FLAD1Q8NFF5 587 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 PIK3R5Q8WYR1 880 aa10.58□□□□□ -0.72
TRIM39-202ENST00000376659 EIF2AK1Q9BQI3 630 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms