RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 CAPRIN1Q14444 709 aaKnown RBP14.76□□□□□ -0.05
COL4A1-201ENST00000375820 SLC39A14Q15043 492 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 MSTO1Q9BUK6 570 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 ZBTB1Q9Y2K1 713 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 LUC7L3O95232 432 aaKnown RBP14.76□□□□□ -0.05
COL4A1-201ENST00000375820 ZBED1O96006 694 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 BMP3P12645 472 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 GRAMD1BQ3KR37 738 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 PDXDC2PQ6P474 469 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 NACC1Q96RE7 527 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 NGRNQ9NPE2 291 aaKnown RBP14.76□□□□□ -0.05
COL4A1-201ENST00000375820 NFU1Q9UMS0 254 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 TEX14Q8IWB6 1497 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 H0Y3Z8 333 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 PSMA2P25787 234 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 CAPN11Q9UMQ6 739 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 LAMC3Q9Y6N6 1575 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 FAM196AQ6ZSG2 479 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 CPVLQ9H3G5 476 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 GJB4Q9NTQ9 266 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 SLC13A4Q9UKG4 626 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 ABCC4O15439 1325 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 MAP3K7O43318 606 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 MED7O43513 233 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 LARGE1O95461 756 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 ARHGDIAP52565 204 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 PYROXD1Q8WU10 500 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 RUNDC3BQ96NL0 473 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 TRAIPQ9BWF2 469 aa14.76□□□□□ -0.05
COL4A1-201ENST00000375820 FOXP1Q9H334 677 aaPredicted RBP14.76□□□□□ -0.05
COL4A1-201ENST00000375820 RPF1Q9H9Y2 349 aaKnown RBP14.76□□□□□ -0.05
COL4A1-201ENST00000375820 MYO1EQ12965 1108 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 FBXO41Q8TF61 875 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 RGS12O14924 1447 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 FOSP01100 380 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 E2F4Q16254 413 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 PARD6BQ9BYG5 372 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 PPP6R2O75170 966 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 SETSIPP0DME0 302 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 GAP43P17677 238 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 CDC37Q16543 378 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 RFX8Q6ZV50 586 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 FRA10AC1Q70Z53 315 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 HEY1Q9Y5J3 304 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 MCTP2Q6DN12 878 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 RAPGEF5Q92565 580 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 DHTKD1Q96HY7 919 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 ABCC12Q96J65 1359 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 HMGXB3Q12766 1538 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 MMP1P03956 469 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 ESRRAP11474 423 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 ZMYM1Q5SVZ6 1142 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 RNF207Q6ZRF8 634 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 TBC1D1Q86TI0 1168 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 RABGGTAQ92696 567 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 MMTAG2Q9BU76 263 aaKnown RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 TTC7AQ9ULT0 858 aaPredicted RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 RASGRF2O14827 1237 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 PLEKHA8P1O95397 391 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 SERPINB2P05120 415 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 MXI1P50539 228 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 BLVRAP53004 296 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 SLC27A3Q5K4L6 730 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 TEX2Q8IWB9 1127 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 GSDMAQ96QA5 445 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 ZMYND12Q9H0C1 365 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 SAYSD1Q9NPB0 183 aa14.75□□□□□ -0.05
COL4A1-201ENST00000375820 AFF4Q9UHB7 1163 aaKnown RBP14.75□□□□□ -0.05
COL4A1-201ENST00000375820 HSPA4LO95757 839 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ARID5BQ14865 1188 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 SNX19Q92543 992 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 PAGE5Q96GU1 130 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 PARVGQ9HBI0 331 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 GDAQ9Y2T3 454 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 CA4P22748 312 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 CCNA1P78396 465 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 NR1H4Q96RI1 486 aaPredicted RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ELAC2Q9BQ52 826 aaKnown RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 SRP68Q9UHB9 627 aaKnown RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 CREB3O43889 395 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ACBD5Q5T8D3 534 aaPredicted RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 TRIM11Q96F44 468 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ZCWPW1Q9H0M4 648 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ZSWIM5Q9P217 1185 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 STK17AQ9UEE5 414 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ESRRGP62508 458 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 GLE1Q53GS7 698 aaKnown RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ATG16L1Q676U5 607 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 FAM47EQ6ZV65 393 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 TTC1Q99614 292 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 GTSE1Q9NYZ3 720 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 EIF3CLB5ME19 914 aaKnown RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 KIF23Q02241 960 aaPredicted RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 AP1ARQ63HQ0 302 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 SPATS2Q86XZ4 545 aaKnown RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 CNKSR1Q969H4 720 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 TTC25Q96NG3 672 aa14.74□□□□□ -0.05
COL4A1-201ENST00000375820 EIF3CQ99613 913 aaKnown RBP14.74□□□□□ -0.05
COL4A1-201ENST00000375820 ZNF341Q9BYN7 854 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms