RNA–Protein interactions for RNA: ENST00000374940.3

HLA-DQA2-210, Transcript of major histocompatibility complex, class II, DQ alpha 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA2, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2-210ENST00000374940 RNPEPQ9H4A4 650 aa13.84□□□□□ -0.19
HLA-DQA2-210ENST00000374940 ZNF302Q9NR11 478 aa13.84□□□□□ -0.19
HLA-DQA2-210ENST00000374940 PDLIM7Q9NR12 457 aa13.84□□□□□ -0.19
HLA-DQA2-210ENST00000374940 VAV3Q9UKW4 847 aa13.84□□□□□ -0.19
HLA-DQA2-210ENST00000374940 PCDHA12Q9UN75 941 aa13.84□□□□□ -0.19
HLA-DQA2-210ENST00000374940 TNRC18O15417 2968 aaPredicted RBP13.83□□□□□ -0.19
HLA-DQA2-210ENST00000374940 B4GALT4O60513 344 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 SMIM10L2AP0DMW4 78 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 SMIM10L2BP0DMW5 78 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PDXDC2PQ6P474 469 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 FERMT3Q86UX7 667 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 CCDC60Q8IWA6 550 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PRDM5Q9NQX1 630 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TRMT13Q9NUP7 481 aaKnown RBP13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TMEM39AQ9NV64 488 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 GABBR1Q9UBS5 961 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 MTMR6Q9Y217 621 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 NOD1Q9Y239 953 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PCDHB6Q9Y5E3 794 aa13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 MAFBQ9Y5Q3 323 aaPredicted RBP13.83□□□□□ -0.2
HLA-DQA2-210ENST00000374940 DNAH12Q6ZR08 3092 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ALPK3Q96L96 1907 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 KIAA0355O15063 1070 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 OR52Z1P0C646 297 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 GNAT1P11488 350 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 MARK3P27448 753 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TXKP42681 527 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 NBR1Q14596 966 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PTGISQ16647 500 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 GDF6Q6KF10 455 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TMEM60Q9H2L4 133 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TTC12Q9H892 705 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TBX21Q9UL17 535 aa13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ZMYND8Q9ULU4 1186 aaPredicted RBP13.82□□□□□ -0.2
HLA-DQA2-210ENST00000374940 NRCAMQ92823 1304 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 POTEB3A0JP26 581 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 H0YGN5 161 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 LAD1O00515 517 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 SYN1P17600 705 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 HOXC8P31273 242 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 SPIRE1Q08AE8 756 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PLCB4Q15147 1175 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 POTEBQ6S5H4 581 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 SH3RF1Q7Z6J0 888 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ATP6V0A1Q93050 837 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ZSCAN16Q9H4T2 348 aaPredicted RBP13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 SETD4Q9NVD3 440 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TRPC6Q9Y210 931 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 IGSF9BQ9UPX0 1349 aa13.81□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TRIM43BA6NCK2 446 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 EML1O00423 815 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 RESTQ13127 1097 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PPFIA1Q13136 1202 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PTGDRQ13258 359 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 EPHA7Q15375 998 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 NCAPH2Q6IBW4 605 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 CKAP2LQ8IYA6 745 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 C4orf32Q8N8J7 132 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ATP8B4Q8TF62 1192 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TRIM43Q96BQ3 446 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 FAM167AQ96KS9 214 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 RRN3P2A6NIE6 340 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 HBP1O60381 514 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 DKC1O60832 514 aaKnown RBP eCLIP13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 P4HBP07237 508 aaKnown RBP13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 CYP2C9P11712 490 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 INSRRP14616 1297 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 RAG1P15918 1043 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ATP4AP20648 1035 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ADAM17P78536 824 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PTK7Q13308 1070 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 HIC1Q14526 733 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 LMBR1Q8WVP7 490 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 BBXQ8WY36 941 aaPredicted RBP13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 CTAGE1Q96RT6 745 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 HIPK3Q9H422 1215 aa13.8□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TREHO43280 583 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ZNF862O60290 1169 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 BMP15O95972 392 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TIMP1P01033 207 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PRPHP41219 470 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 TECP42680 631 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 QARSP47897 775 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PSMC5P62195 406 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 GRIK4Q16099 956 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 UGCGQ16739 394 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ZNF484Q5JVG2 852 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 CCDC155Q8N6L0 562 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 LBHD1Q9BQE6 289 aaPredicted RBP13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 NOC4LQ9BVI4 516 aaKnown RBP13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 NRBP2Q9NSY0 501 aa13.79□□□□□ -0.2
HLA-DQA2-210ENST00000374940 COL1A2P08123 1366 aa13.78□□□□□ -0.2
HLA-DQA2-210ENST00000374940 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
HLA-DQA2-210ENST00000374940 OATP04181 439 aa13.78□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ZSCAN22P10073 491 aaPredicted RBP13.78□□□□□ -0.2
HLA-DQA2-210ENST00000374940 ITGB8P26012 769 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms