RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 MED14O60244 1454 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 UNC13BO14795 1591 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.05□□□□□ -0.64
CD28-202ENST00000374481 IQCA1LA6NCM1 817 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 TARSP26639 723 aaKnown RBP11.05□□□□□ -0.64
CD28-202ENST00000374481 ZNF76P36508 570 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 POLA2Q14181 598 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 CRACR2BQ8N4Y2 399 aaPredicted RBP11.05□□□□□ -0.64
CD28-202ENST00000374481 STK32AQ8WU08 396 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 LAMC1P11047 1609 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 IQGAP3Q86VI3 1631 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 ASAP2O43150 1006 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 BTKQ06187 659 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 DMPKQ09013 629 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 TBX2Q13207 712 aaPredicted RBP11.05□□□□□ -0.64
CD28-202ENST00000374481 TMCO1Q9UM00 188 aa11.05□□□□□ -0.64
CD28-202ENST00000374481 EXOC1LA0A1B0GW35 172 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 KIF28PB7ZC32 967 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 UPP2O95045 317 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 MMP1P03956 469 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 IMPDH2P12268 514 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 MAGEA8P43361 318 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 NAPAP54920 295 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 KCNJ2P63252 427 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 RABGAP1LQ5R372 815 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 SNX30Q5VWJ9 437 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 ZNF579Q8NAF0 562 aaKnown RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 GRK7Q8WTQ7 553 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 FERMT1Q9BQL6 677 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 HAUS8Q9BT25 410 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 RNPEPL1Q9HAU8 725 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 LRRC53A6NM62 1247 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 ABLIM1O14639 778 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 HMGB2P26583 209 aaKnown RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 EEF1DP29692 281 aaKnown RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 GNAQP50148 359 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 NOP14P78316 857 aaKnown RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 TSGA10IPQ3SY00 556 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 ENAHQ8N8S7 591 aaPredicted RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 KCNB2Q92953 911 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 ZC4H2Q9NQZ6 224 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 ATP10AO60312 1499 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 ADGRL3Q9HAR2 1447 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 PODXLO00592 558 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 RIPK1Q13546 671 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 TSNARE1Q96NA8 513 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 PPARGC1AQ9UBK2 798 aaKnown RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 HAO1Q9UJM8 370 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 NOC2LQ9Y3T9 749 aaKnown RBP11.04□□□□□ -0.64
CD28-202ENST00000374481 ERBB3P21860 1342 aa11.04□□□□□ -0.64
CD28-202ENST00000374481 LSM1O15116 133 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 SMNDC1O75940 238 aaKnown RBP eCLIP11.03□□□□□ -0.64
CD28-202ENST00000374481 GNA14O95837 355 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 UQCRFS1P1P0C7P4 283 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 KRT10P13645 584 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 STMN1P16949 149 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 LMNB1P20700 586 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 PPP2R5BQ15173 497 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 SLC26A7Q8TE54 656 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 LACRTQ9GZZ8 138 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 IFT122Q9HBG6 1241 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 AGPAT5Q9NUQ2 364 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 HNRNPRO43390 633 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 GLI1P08151 1106 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 PRCPP42785 496 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 CABP4P57796 275 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 P3H1Q32P28 736 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 HERC4Q5GLZ8 1057 aaPredicted RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 LGSNQ5TDP6 509 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 BBOF1Q8ND07 529 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 MAML1Q92585 1016 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 SMYD3Q9H7B4 428 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 TUBA8Q9NY65 449 aaPredicted RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 DBR1Q9UK59 544 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 MROH7-TTC4A0A0A0MT08 1334 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 TTC37Q6PGP7 1564 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 TMEM120BA0PK00 339 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 DNM1LO00429 736 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 SERPINB8P50452 374 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 PEX5P50542 639 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 PDE1BQ01064 536 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 C10orf76Q5T2E6 689 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 CC2D2BQ6DHV5 1058 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 ALKBH5Q6P6C2 394 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 PROCA1Q8NCQ7 364 aaPredicted RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 TBC1D7Q9P0N9 293 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 DUSP10Q9Y6W6 482 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 ZNF233A6NK53 670 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 TTI1O43156 1089 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 MGRN1O60291 552 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 MAN1A2O60476 641 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 STK10O94804 968 aaKnown RBP11.03□□□□□ -0.64
CD28-202ENST00000374481 PYGBP11216 843 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 ATP6V1B1P15313 513 aa11.03□□□□□ -0.64
CD28-202ENST00000374481 LONP1P36776 959 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms