RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 AZI2Q9H6S1 392 aa20.69■□□□□ 0.9
PBX3-205ENST00000373492 HDAC6Q9UBN7 1215 aa20.69■□□□□ 0.9
PBX3-205ENST00000373492 GTF2IRD1Q9UHL9 959 aa20.69■□□□□ 0.9
PBX3-205ENST00000373492 NOD1Q9Y239 953 aa20.69■□□□□ 0.9
PBX3-205ENST00000373492 SAMM50Q9Y512 469 aa20.69■□□□□ 0.9
PBX3-205ENST00000373492 WNT7AO00755 349 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 SFNP31947 248 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 PPIGQ13427 754 aaKnown RBP eCLIP20.68■□□□□ 0.94e-6■■□□□ 13.5
PBX3-205ENST00000373492 ZNF174Q15697 407 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 PTGISQ16647 500 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 GDF6Q6KF10 455 aaPredicted RBP20.68■□□□□ 0.9
PBX3-205ENST00000373492 PPP1R13LQ8WUF5 828 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 GLG1Q92896 1179 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 GJA10Q969M2 543 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 SMARCAD1Q9H4L7 1026 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 MTMR6Q9Y217 621 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 TELO2Q9Y4R8 837 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 EMSYQ7Z589 1322 aa20.68■□□□□ 0.9
PBX3-205ENST00000373492 LAMA3Q16787 3333 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 WDR64B1ANS9 1081 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 ATG7O95352 703 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 CCNE2O96020 404 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 PSAPP07602 524 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 CYP2C9P11712 490 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 CYP2C18P33260 490 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 ANP32AP39687 249 aaKnown RBP20.67■□□□□ 0.9
PBX3-205ENST00000373492 FXR1P51114 621 aaKnown RBP eCLIP20.67■□□□□ 0.9
PBX3-205ENST00000373492 JAK3P52333 1124 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 LRIT3Q3SXY7 679 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 FAM160B1Q5W0V3 765 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 HAS1Q92839 578 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 ZSCAN16Q9H4T2 348 aaPredicted RBP20.67■□□□□ 0.9
PBX3-205ENST00000373492 PCDHA10Q9Y5I2 948 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 ARID2Q68CP9 1835 aa20.67■□□□□ 0.9
PBX3-205ENST00000373492 PITPNM1O00562 1244 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 BACH1O14867 736 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 CHMP2AO43633 222 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 TOB1P50616 345 aaPredicted RBP20.66■□□□□ 0.9
PBX3-205ENST00000373492 BFSP2Q13515 415 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 ABHD15Q6UXT9 468 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 MIER3Q7Z3K6 550 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 RDM1Q8NG50 284 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 UNC45AQ9H3U1 944 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 DISC1Q9NRI5 854 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 ERAP1Q9NZ08 941 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 PCDHA12Q9UN75 941 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 PCDHB6Q9Y5E3 794 aa20.66■□□□□ 0.9
PBX3-205ENST00000373492 LGR5O75473 907 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 OR52Z1P0C646 297 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 CSF2RAP15509 400 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 TXKP42681 527 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 STAT5BP51692 787 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 PPP2R5CQ13362 524 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 NBR1Q14596 966 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 SHHQ15465 462 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 PLPPR4Q7Z2D5 763 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 TRIM50Q86XT4 487 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 CCDC155Q8N6L0 562 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 CAGE1Q8TC20 777 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 TNPO1Q92973 898 aaKnown RBP20.65■□□□□ 0.9
PBX3-205ENST00000373492 CTAGE1Q96RT6 745 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 TTC12Q9H892 705 aaPredicted RBP20.65■□□□□ 0.9
PBX3-205ENST00000373492 ZNF302Q9NR11 478 aa20.65■□□□□ 0.9
PBX3-205ENST00000373492 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.65■□□□□ 0.9
PBX3-205ENST00000373492 DAXXQ9UER7 740 aaPredicted RBP20.65■□□□□ 0.9
PBX3-205ENST00000373492 UMODL1Q5DID0 1318 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 IGKV6D-21A0A0A0MT36 114 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 LAD1O00515 517 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 HOXC8P31273 242 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 SLC26A2P50443 739 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 EPHB4P54760 987 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 RESTQ13127 1097 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 PTK7Q13308 1070 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 C9orf50Q5SZB4 431 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 SWSAP1Q6NVH7 229 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 RETREG2Q8NC44 543 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 AFAP1L1Q8TED9 768 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 MTMR9Q96QG7 549 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 WNT8AQ9H1J5 351 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 TMEM60Q9H2L4 133 aa20.64■□□□□ 0.89
PBX3-205ENST00000373492 C17orf102A2RUQ5 167 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 SMIM10L2AP0DMW4 78 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 SMIM10L2BP0DMW5 78 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 GNAT1P11488 350 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 CCL23P55773 120 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 PTGDRQ13258 359 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 TMEM266Q2M3C6 531 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 NCAPH2Q6IBW4 605 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 B3GNT9Q6UX72 402 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 CCDC60Q8IWA6 550 aaPredicted RBP20.63■□□□□ 0.89
PBX3-205ENST00000373492 RPUSD2Q8IZ73 545 aaKnown RBP20.63■□□□□ 0.89
PBX3-205ENST00000373492 IL23AQ9NPF7 189 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 VAV3Q9UKW4 847 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 CEP131Q9UPN4 1083 aa20.63■□□□□ 0.89
PBX3-205ENST00000373492 TANC1Q9C0D5 1861 aa20.62■□□□□ 0.89
PBX3-205ENST00000373492 ZSCAN22P10073 491 aaPredicted RBP20.62■□□□□ 0.89
PBX3-205ENST00000373492 MARK3P27448 753 aa20.62■□□□□ 0.89
PBX3-205ENST00000373492 RFC2P35250 354 aa20.62■□□□□ 0.89
PBX3-205ENST00000373492 RBL2Q08999 1139 aa20.62■□□□□ 0.89
PBX3-205ENST00000373492 PDXDC2PQ6P474 469 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms