RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 DDX42Q86XP3 938 aaKnown RBP eCLIP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 SPATS2Q86XZ4 545 aaKnown RBP5.61□□□□□ -1.51
UBE3D-202ENST00000369746 WDR63Q8IWG1 891 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 OSBPL9Q96SU4 736 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 L2HGDHQ9H9P8 463 aa5.61□□□□□ -1.51
UBE3D-202ENST00000369746 BTBD11A6QL63 1104 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 AKR1B15C9JRZ8 316 aaPredicted RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 PROB1E7EW31 1015 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 LGR5O75473 907 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 PAHP00439 452 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 MRPS35P82673 323 aaKnown RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 SMAD4Q13485 552 aaKnown RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 ECM1Q16610 540 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 DBN1Q16643 649 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC38Q502W7 563 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 FAM83AQ86UY5 434 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 SUN5Q8TC36 379 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 LZICQ8WZA0 190 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 KCNN1Q92952 543 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 STK31Q9BXU1 1019 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 CCDC68Q9H2F9 335 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 ZNF408Q9H9D4 720 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 RGL1Q9NZL6 768 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 EIF2B4Q9UI10 523 aaKnown RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 SCN9AQ15858 1988 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 GOLGA6L10A6NI86 522 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 LRRC72A6NJI9 287 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 ERLIN2O94905 339 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 PYGBP11216 843 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 CENPAP49450 140 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 BCAMP50895 628 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 GABREP78334 506 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 TMCO3Q6UWJ1 677 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 GALNT5Q7Z7M9 940 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 SLC44A2Q8IWA5 706 aaPredicted RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 TBC1D16Q8TBP0 767 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 CLIP3Q96DZ5 547 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 SAAL1Q96ER3 474 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 CABS1Q96KC9 395 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 UBE2OQ9C0C9 1292 aaKnown RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 ZC3H12CQ9C0D7 883 aaKnown RBP5.6□□□□□ -1.51
UBE3D-202ENST00000369746 ATP8A2Q9NTI2 1148 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 QPCTLQ9NXS2 382 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 STAP2Q9UGK3 403 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 ZNF112Q9UJU3 913 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 WDR37Q9Y2I8 494 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 A0A1B0GUL6 1792 aa5.6□□□□□ -1.51
UBE3D-202ENST00000369746 PIK3CDO00329 1044 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 FMNL1O95466 1100 aaPredicted RBP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 MYCP01106 439 aaPredicted RBP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 HMGCRP04035 888 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 CCNCP24863 283 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 CDR1P51861 262 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 MAP3K9P80192 1104 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 POSTNQ15063 836 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 PLCB4Q15147 1175 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 SEPT7Q16181 437 aaKnown RBP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 DACT2Q5SW24 774 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 XRRA1Q6P2D8 792 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 LRRC31Q6UY01 552 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 ZNF354CQ86Y25 554 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 DZIP1Q86YF9 867 aaKnown RBP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 FAM81AQ8TBF8 368 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 CDX2Q99626 313 aaPredicted RBP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 KATNAL1Q9BW62 490 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 NEUROD4Q9HD90 331 aa5.59□□□□□ -1.51
UBE3D-202ENST00000369746 ALG13Q9NP73 1137 aaKnown RBP5.59□□□□□ -1.51
UBE3D-202ENST00000369746 VSTM5A8MXK1 200 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 TMOD1P28289 359 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 GALNSP34059 522 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 MAGEA10P43363 369 aaPredicted RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 GCLCP48506 637 aaPredicted RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 MXI1P50539 228 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 CCNHP51946 323 aaPredicted RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 EPHB1P54762 984 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 APBA1Q02410 837 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 LMNB2Q03252 620 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 DCAF15Q66K64 600 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 FASTKD5Q7L8L6 764 aaKnown RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 KIAA0907Q7Z7F0 614 aaPredicted RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 LRRC43Q8N309 656 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 TNIP2Q8NFZ5 429 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 SOCS4Q8WXH5 440 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 HERVK_113Q902F9 699 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 PPP1R14BQ96C90 147 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 RSRC1Q96IZ7 334 aaKnown RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 NEK1Q96PY6 1258 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 ANKRD2Q9GZV1 360 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 HMX1Q9NP08 348 aaPredicted RBP5.59□□□□□ -1.52
UBE3D-202ENST00000369746 BLOC1S4Q9NUP1 217 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 KIAA1468Q9P260 1216 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 GGA1Q9UJY5 639 aa5.59□□□□□ -1.52
UBE3D-202ENST00000369746 CD86P42081 329 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 POLD2P49005 469 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 TUBB4BP68371 445 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 CYP4A11Q02928 519 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 SCRN1Q12765 414 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 MORC3Q14149 939 aa5.58□□□□□ -1.52
UBE3D-202ENST00000369746 RAB30Q15771 203 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms