RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 FAM47AQ5JRC9 791 aa19.07■□□□□ 0.64
CHTOP-203ENST00000368690 SEC14L1Q92503 715 aa19.07■□□□□ 0.64
CHTOP-203ENST00000368690 ZMYND12Q9H0C1 365 aa19.07■□□□□ 0.64
CHTOP-203ENST00000368690 CCDC88AQ3V6T2 1871 aa19.07■□□□□ 0.64
CHTOP-203ENST00000368690 A0A1B0GUA9 196 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 KIAA0753Q2KHM9 967 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 KLHL7Q8IXQ5 586 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 LZTS2Q9BRK4 669 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 CRNKL1Q9BZJ0 848 aaKnown RBP19.06■□□□□ 0.64
CHTOP-203ENST00000368690 SLITRK6Q9H5Y7 841 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 DCP1AQ9NPI6 582 aaPredicted RBP19.06■□□□□ 0.64
CHTOP-203ENST00000368690 KIF4AO95239 1232 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 PDHBP11177 359 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 DRD4P21917 467 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 PDE6BP35913 854 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 EIF3BP55884 814 aaKnown RBP19.06■□□□□ 0.64
CHTOP-203ENST00000368690 NONOQ15233 471 aaKnown RBP eCLIP19.06■□□□□ 0.64
CHTOP-203ENST00000368690 TMC4Q7Z404 712 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 BLOC1S4Q9NUP1 217 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 COL4A3BPQ9Y5P4 624 aa19.06■□□□□ 0.64
CHTOP-203ENST00000368690 MYMKA6NI61 221 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 GNA14O95837 355 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 MARSP56192 900 aaKnown RBP19.05■□□□□ 0.64
CHTOP-203ENST00000368690 SLC8A3P57103 927 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 SPRED3Q2MJR0 410 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 CRELD2Q6UXH1 353 aaPredicted RBP19.05■□□□□ 0.64
CHTOP-203ENST00000368690 CEP57Q86XR8 500 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 PNMA1Q8ND90 353 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 TBC1D5Q92609 795 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 HVCN1Q96D96 273 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 CEP63Q96MT8 703 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 MAD2L2Q9UI95 211 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 PPIP5K2O43314 1243 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 FKBP3Q00688 224 aaKnown RBP19.05■□□□□ 0.64
CHTOP-203ENST00000368690 GRB10Q13322 594 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 RIPK1Q13546 671 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 ZCWPW2Q504Y3 356 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 ODF2Q5BJF6 829 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 NEK8Q86SG6 692 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 ZNF384Q8TF68 577 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 HPS3Q969F9 1004 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 TLCD1Q96CP7 247 aa19.05■□□□□ 0.64
CHTOP-203ENST00000368690 FAM84BQ96KN1 310 aaPredicted RBP19.05■□□□□ 0.64
CHTOP-203ENST00000368690 CNOT8Q9UFF9 292 aaKnown RBP19.05■□□□□ 0.64
CHTOP-203ENST00000368690 MYH4Q9Y623 1939 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 MYH7BA7E2Y1 1941 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 PGRMC1O00264 195 aaKnown RBP19.04■□□□□ 0.64
CHTOP-203ENST00000368690 TMOD1P28289 359 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 SEPT2Q15019 361 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 TBC1D22AQ8WUA7 517 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.04■□□□□ 0.642e-9■■■■□ 19.3
CHTOP-203ENST00000368690 NLRC4Q9NPP4 1024 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 FBXL5Q9UKA1 691 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 ANKRD31Q8N7Z5 1873 aa19.04■□□□□ 0.64
CHTOP-203ENST00000368690 CCDC189A1A4V9 331 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 KCNK3O14649 394 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 SART1O43290 800 aaKnown RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 CCNT1O60563 726 aaKnown RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 BBOX1O75936 387 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 ZBTB48P10074 688 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 SCP2P22307 547 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 ANXA13P27216 316 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 ERMARDQ5T6L9 678 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 HEATR3Q7Z4Q2 680 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 TMC3Q7Z5M5 1100 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 CPLX4Q7Z7G2 160 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 FMNL3Q8IVF7 1028 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 LARP4BQ92615 738 aaKnown RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 HOOK2Q96ED9 719 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 CHMP6Q96FZ7 201 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 PSMD1Q99460 953 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 TANGO6Q9C0B7 1094 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 FAM114A2Q9NRY5 505 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 NOVA2Q9UNW9 492 aaKnown RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 A0A087X0T9 212 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 KLRG2A4D1S0 409 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 PPEF1O14829 653 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 FAM228BP0C875 321 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 HOXA10P31260 410 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 HIBADHP31937 336 aaKnown RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 TECP42680 631 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 FXR2P51116 673 aaKnown RBP eCLIP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 GPSM2P81274 684 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 KLHL30Q0D2K2 578 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 RASGEF1CQ8N431 466 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 MAB21L3Q8N8X9 362 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 LRRC57Q8N9N7 239 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 OR2W6PQ8NHA6 318 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 SCLT1Q96NL6 688 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 GPR101Q96P66 508 aaPredicted RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 CRAMP1Q96RY5 1269 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 LSM14BQ9BX40 385 aaKnown RBP19.03■□□□□ 0.64
CHTOP-203ENST00000368690 KIF13BQ9NQT8 1826 aa19.03■□□□□ 0.64
CHTOP-203ENST00000368690 CCT8L1PA6NM43 557 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 UFL1O94874 794 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 NPR1P16066 1061 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 POLR2FP61218 127 aaKnown RBP19.02■□□□□ 0.64
CHTOP-203ENST00000368690 ELF3P78545 371 aaPredicted RBP19.02■□□□□ 0.64
CHTOP-203ENST00000368690 ATP2B2Q01814 1243 aa19.02■□□□□ 0.64
CHTOP-203ENST00000368690 ITIH4Q14624 930 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms