RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 SMPD1P17405 629 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 MARCKSP29966 332 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-204ENST00000368640 PTPAQ15257 358 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 EPHA7Q15375 998 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 EXOC8Q8IYI6 725 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
LAMA4-204ENST00000368640 HAS1Q92839 578 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 FAM167AQ96KS9 214 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 SEZ6LQ9BYH1 1024 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 SMARCAD1Q9H4L7 1026 aa13.18□□□□□ -0.3
LAMA4-204ENST00000368640 GNEQ9Y223 722 aaKnown RBP13.18□□□□□ -0.3
LAMA4-204ENST00000368640 DDX11L8A8MPP1 907 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 P4HBP07237 508 aaKnown RBP13.17□□□□□ -0.3
LAMA4-204ENST00000368640 CCL5P13501 91 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 GJA9P57773 515 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 ACTR2P61160 394 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 SP4Q02446 784 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 ITGB3BPQ13352 177 aaPredicted RBP13.17□□□□□ -0.3
LAMA4-204ENST00000368640 ADALQ6DHV7 355 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 OTUD6AQ7L8S5 288 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 CKAP2LQ8IYA6 745 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 C4orf32Q8N8J7 132 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 IGSF22Q8N9C0 903 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 SNX29Q8TEQ0 813 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 GLG1Q92896 1179 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 TMEM60Q9H2L4 133 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 TUFT1Q9NNX1 390 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 LOXHD1Q8IVV2 1947 aa13.17□□□□□ -0.3
LAMA4-204ENST00000368640 EMSYQ7Z589 1322 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 MYH9P35579 1960 aaKnown RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 A0A1W2PQ27 194 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 A0A1W2PQ64 194 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 A0A1W2PQD8 194 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 MOXD2PA6NHM9 499 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 A6NJR5 290 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 ATP9AO75110 1047 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 ARIH2O95376 493 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 SUPT20HL2P0C7V6 817 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 CST5P28325 142 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 CCND3P30281 292 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 TCF7P36402 384 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 QARSP47897 775 aaKnown RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 PSMC5P62195 406 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 ARHGAP1Q07960 439 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 MTFR1Q15390 333 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 GNASQ5JWF2 1037 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 TSEN34Q9BSV6 310 aaKnown RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 POLR3CQ9BUI4 534 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 LRRC27Q9C0I9 530 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 UPF3AQ9H1J1 476 aaKnown RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 ZSWIM4Q9H7M6 989 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 NRBP2Q9NSY0 501 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 ERAP1Q9NZ08 941 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
LAMA4-204ENST00000368640 PPME1Q9Y570 386 aa13.16□□□□□ -0.3
LAMA4-204ENST00000368640 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 A0A1W2PPC1 479 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 SOX1O00570 391 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 DHX15O43143 795 aaKnown RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 EDIL3O43854 480 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 GJB1P08034 283 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 MMP3P08254 477 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 RPA1P27694 616 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 CCT6AP40227 531 aaKnown RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 STAT5BP51692 787 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 UBE2HP62256 183 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 NKX3-2P78367 333 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 SP2Q02086 613 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 TRIM32Q13049 653 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 PDXDC2PQ6P474 469 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 PLPPR4Q7Z2D5 763 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 CABP7Q86V35 215 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 ANKLE1Q8NAG6 615 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 TMEM87AQ8NBN3 555 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 TRPV1Q8NER1 839 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 AFG1LQ8WV93 481 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 MRPS27Q92552 414 aaKnown RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 LRCH3Q96II8 777 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 GLT1D1Q96MS3 346 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 GPR20Q99678 358 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 FTOQ9C0B1 505 aaKnown RBP eCLIP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 CCSER1Q9C0I3 900 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 UNC45AQ9H3U1 944 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 CUEDC2Q9H467 287 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 MAGEF1Q9HAY2 307 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 PAK6Q9NQU5 681 aaPredicted RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 USP25Q9UHP3 1055 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
LAMA4-204ENST00000368640 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 PCDHA7Q9UN72 937 aa13.15□□□□□ -0.3
LAMA4-204ENST00000368640 SYNRGQ9UMZ2 1314 aa13.14□□□□□ -0.31
LAMA4-204ENST00000368640 WNT7AO00755 349 aa13.14□□□□□ -0.31
LAMA4-204ENST00000368640 ATG7O95352 703 aa13.14□□□□□ -0.31
LAMA4-204ENST00000368640 TFRCP02786 760 aaKnown RBP13.14□□□□□ -0.31
LAMA4-204ENST00000368640 GNAT1P11488 350 aa13.14□□□□□ -0.31
LAMA4-204ENST00000368640 XRCC6P12956 609 aaKnown RBP eCLIP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms