RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 KCNMB3Q9NPA1 279 aa25.39■■□□□ 1.65
ECHDC1-203ENST00000368291 LAMA3Q16787 3333 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 CCNT1O60563 726 aaKnown RBP25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 LRCH2Q5VUJ6 765 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 SERINC5Q86VE9 423 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 CAGE1Q8TC20 777 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 AFAP1L1Q8TED9 768 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 LMBR1Q8WVP7 490 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 ATP6V0A1Q93050 837 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 AZI2Q9H6S1 392 aa25.38■■□□□ 1.65
ECHDC1-203ENST00000368291 EVPLQ92817 2033 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 GAS7O60861 476 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 PPIGQ13427 754 aaKnown RBP eCLIP25.37■■□□□ 1.658e-6■■■■□ 22.7
ECHDC1-203ENST00000368291 PLCB4Q15147 1175 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 MIS18BP1Q6P0N0 1132 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 SMAP1Q8IYB5 467 aaPredicted RBP25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 TEKT3Q9BXF9 490 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 UNC45AQ9H3U1 944 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 NRCAMQ92823 1304 aa25.37■■□□□ 1.65
ECHDC1-203ENST00000368291 IQCF3P0C7M6 154 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 ATP4AP20648 1035 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 BFSP2Q13515 415 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 CUL4AQ13619 759 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 SAFBQ15424 915 aaKnown RBP eCLIP25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 SWSAP1Q6NVH7 229 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 HAS1Q92839 578 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.36■■□□□ 1.657e-6■■■■□ 21.2
ECHDC1-203ENST00000368291 FOXP1Q9H334 677 aaPredicted RBP25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 PCDHA10Q9Y5I2 948 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 MAFBQ9Y5Q3 323 aaPredicted RBP25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 SIP14410 1827 aa25.36■■□□□ 1.65
ECHDC1-203ENST00000368291 KIF28PB7ZC32 967 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 ACRP10323 421 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 CKBP12277 381 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 INSRRP14616 1297 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 GJB2P29033 226 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 PPFIA1Q13136 1202 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 TMEM240Q5SV17 173 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 MARCH8Q5T0T0 291 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 TRAF7Q6Q0C0 670 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 POTEDQ86YR6 584 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 NAP1L4Q99733 375 aaKnown RBP25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 IL23AQ9NPF7 189 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 ZNF302Q9NR11 478 aa25.35■■□□□ 1.65
ECHDC1-203ENST00000368291 BACH1O14867 736 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 PSAPP07602 524 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 GNAT1P11488 350 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 GPNMBQ14956 572 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 GRIK4Q16099 956 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 CCDC155Q8N6L0 562 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 RETREG2Q8NC44 543 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 FAM20AQ96MK3 541 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 DISC1Q9NRI5 854 aa25.34■■□□□ 1.65
ECHDC1-203ENST00000368291 LOXHD1Q8IVV2 1947 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 WDR64B1ANS9 1081 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 RBAK-RBAKDNI3L0D1 243 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 TBX3O15119 743 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 CHMP2AO43633 222 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 SLC26A2P50443 739 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 FXR1P51114 621 aaKnown RBP eCLIP25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 FAM160B1Q5W0V3 765 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 PDXDC2PQ6P474 469 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 TCEAL9Q9UHQ7 104 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 IGSF9BQ9UPX0 1349 aa25.33■■□□□ 1.65
ECHDC1-203ENST00000368291 POTEB3A0JP26 581 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 MBLAC1A4D2B0 266 aaPredicted RBP25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 SOX1O00570 391 aaPredicted RBP25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 SELPP16109 830 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 U2AF2P26368 475 aaKnown RBP eCLIP25.32■■□□□ 1.648e-7■■■■□ 25.7
ECHDC1-203ENST00000368291 SFNP31947 248 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 LRIT3Q3SXY7 679 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 ZNF618Q5T7W0 954 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 POTEBQ6S5H4 581 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 ZNF365Q70YC5 407 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 GABBR1Q9UBS5 961 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 VAV3Q9UKW4 847 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 SAMM50Q9Y512 469 aa25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 LAMA2P24043 3122 aaKnown RBP25.32■■□□□ 1.64
ECHDC1-203ENST00000368291 JAK3P52333 1124 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 PPP2R5CQ13362 524 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 UGCGQ16739 394 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 LRRC8DQ7L1W4 858 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 NOSTRINQ8IVI9 506 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 ATP8B4Q8TF62 1192 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 TRAPPC12Q8WVT3 735 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 ZBTB10Q96DT7 871 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 SMC3Q9UQE7 1217 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 TRPC6Q9Y210 931 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 KIF3AQ9Y496 699 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 RRN3P2A6NIE6 340 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 EML1O00423 815 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 ZNF862O60290 1169 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 IGBP1P78318 339 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 RUFY4Q6ZNE9 571 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 MIER3Q7Z3K6 550 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 RDM1Q8NG50 284 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 TUBE1Q9UJT0 475 aa25.31■■□□□ 1.64
ECHDC1-203ENST00000368291 ZBTB42B2RXF5 422 aa25.3■■□□□ 1.64
ECHDC1-203ENST00000368291 HBP1O60381 514 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms