RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SWAP70Q9UH65 585 aa20.89■□□□□ 0.94
CMTM3-201ENST00000361909 SLC12A6Q9UHW9 1150 aa20.89■□□□□ 0.94
CMTM3-201ENST00000361909 SIK3Q9Y2K2 1263 aa20.89■□□□□ 0.94
CMTM3-201ENST00000361909 COL4A5P29400 1685 aa20.89■□□□□ 0.94
CMTM3-201ENST00000361909 LTBP3Q9NS15 1303 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 FAM153BP0C7A2 387 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 MYBP10242 640 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 SEC24CP53992 1094 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 MTMR3Q13615 1198 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 FAM153CQ494X1 144 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 RCSD1Q6JBY9 416 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 MAATS1Q7Z4T9 603 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 DHX36Q9H2U1 1008 aaKnown RBP20.89■□□□□ 0.93
CMTM3-201ENST00000361909 SH3GLB2Q9NR46 395 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 IL17RBQ9NRM6 502 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 FAM153AQ9UHL3 310 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 PLAAQ9Y263 795 aa20.89■□□□□ 0.93
CMTM3-201ENST00000361909 PPP1R12AO14974 1030 aaPredicted RBP20.88■□□□□ 0.93
CMTM3-201ENST00000361909 SLC8A3P57103 927 aa20.88■□□□□ 0.93
CMTM3-201ENST00000361909 CACNA2D3Q8IZS8 1091 aa20.88■□□□□ 0.93
CMTM3-201ENST00000361909 AGBL3Q8NEM8 1001 aa20.88■□□□□ 0.93
CMTM3-201ENST00000361909 RASSF8Q8NHQ8 419 aa20.88■□□□□ 0.93
CMTM3-201ENST00000361909 NEDD1Q8NHV4 660 aa20.88■□□□□ 0.93
CMTM3-201ENST00000361909 CASKIN2Q8WXE0 1202 aa20.88■□□□□ 0.93
CMTM3-201ENST00000361909 DDX20Q9UHI6 824 aaKnown RBP20.88■□□□□ 0.93
CMTM3-201ENST00000361909 CCDC189A1A4V9 331 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 NMT2O60551 498 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 HLA-DOAP06340 250 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 CXCR5P32302 372 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 PRPHP41219 470 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 UBA7P41226 1012 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 PFKFB3Q16875 520 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-201ENST00000361909 ASTE1Q2TB18 679 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-201ENST00000361909 VWA3BQ502W6 1294 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 SLC44A5Q8NCS7 719 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 IFT81Q8WYA0 676 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 AK8Q96MA6 479 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 HINFPQ9BQA5 517 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 ISCUQ9H1K1 167 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 KDM4CQ9H3R0 1056 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 CENPHQ9H3R5 247 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 HDAC9Q9UKV0 1011 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 PLEKP08567 350 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-201ENST00000361909 MAN2A1Q16706 1144 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 SYN2Q92777 582 aaPredicted RBP20.87■□□□□ 0.93
CMTM3-201ENST00000361909 SERPINB13Q9UIV8 391 aa20.87■□□□□ 0.93
CMTM3-201ENST00000361909 RAD17O75943 681 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 ANKRD40Q6AI12 368 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 CNNM4Q6P4Q7 775 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 FOXR2Q6PJQ5 311 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 JDP2Q8WYK2 163 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 OGFOD1Q8N543 542 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 INPP4AQ96PE3 977 aaPredicted RBP20.86■□□□□ 0.93
CMTM3-201ENST00000361909 C7orf25Q9BPX7 421 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 OSBPL7Q9BZF2 842 aa20.86■□□□□ 0.93
CMTM3-201ENST00000361909 PLIN4Q96Q06 1357 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 NCK2O43639 380 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 MGRN1O60291 552 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 NOVP48745 357 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 AMPD3Q01432 767 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 NFIAQ12857 509 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 SLMAPQ14BN4 828 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 GKAP1Q5VSY0 366 aaPredicted RBP20.85■□□□□ 0.93
CMTM3-201ENST00000361909 HOOK2Q96ED9 719 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 MTMR8Q96EF0 704 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 NDST4Q9H3R1 872 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 CNOT10Q9H9A5 744 aaKnown RBP20.85■□□□□ 0.93
CMTM3-201ENST00000361909 PPANQ9NQ55 473 aaKnown RBP20.85■□□□□ 0.93
CMTM3-201ENST00000361909 SMARCAL1Q9NZC9 954 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 EHD2Q9NZN4 543 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 TPX2Q9ULW0 747 aaKnown RBP20.85■□□□□ 0.93
CMTM3-201ENST00000361909 BCS1LQ9Y276 419 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 PCDHGC5Q9Y5F6 944 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 ARFGEF1Q9Y6D6 1849 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 NFKBIEO00221 500 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 ENTPD3O75355 529 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 SCP2P22307 547 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 SCTRP47872 440 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 GUCY2FP51841 1108 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 PDE4DQ08499 809 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 PDXDC1Q6P996 788 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 TLDC1Q6P9B6 456 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 BLIDQ8IZY5 108 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 SEC16BQ96JE7 1060 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 PSMB7Q99436 277 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 BATF3Q9NR55 127 aa20.85■□□□□ 0.93
CMTM3-201ENST00000361909 COL2A1P02458 1487 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-201ENST00000361909 MYCNP04198 464 aaPredicted RBP20.84■□□□□ 0.93
CMTM3-201ENST00000361909 GSTA1P08263 222 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 PPP2R2AP63151 447 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 MRPS25P82663 173 aaKnown RBP20.84■□□□□ 0.93
CMTM3-201ENST00000361909 CEP57Q86XR8 500 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 MTMR14Q8NCE2 650 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 TATDN2Q93075 761 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 FAM198AQ9UFP1 575 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 TMEM59LQ9UK28 342 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 PCDHAC2Q9Y5I4 1007 aa20.84■□□□□ 0.93
CMTM3-201ENST00000361909 LRRC53A6NM62 1247 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 KIF5BP33176 963 aa20.83■□□□□ 0.93
CMTM3-201ENST00000361909 IRX1P78414 480 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms