RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 FLT4P35916 1363 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 ZBED1O96006 694 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 OR6B3Q8NGW1 331 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 PPP1R13BQ96KQ4 1090 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 TXLNGQ9NUQ3 528 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 ADA2Q9NZK5 511 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 KCNG1Q9UIX4 513 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 ZMYM6O95789 1325 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 SUPT3HB4E1H0 165 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 EIF3CLB5ME19 914 aaKnown RBP11.33□□□□□ -0.6
FXR1-202ENST00000357559 PSMA2P25787 234 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 THEMIS2Q5TEJ8 643 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 IFNL3Q8IZI9 196 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 EIF3CQ99613 913 aaKnown RBP11.33□□□□□ -0.6
FXR1-202ENST00000357559 PIDD1Q9HB75 910 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 IQGAP2Q13576 1575 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 ZNF263O14978 683 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 HSPA8P11142 646 aaKnown RBP11.33□□□□□ -0.6
FXR1-202ENST00000357559 HSPA6P17066 643 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 IFNA8P32881 189 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 SLC7A3Q8WY07 619 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 ZNF668Q96K58 619 aaPredicted RBP11.33□□□□□ -0.6
FXR1-202ENST00000357559 TUBGCP2Q9BSJ2 902 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 NDFIP2Q9NV92 336 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 RIMS2Q9UQ26 1411 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 KRT26Q7Z3Y9 468 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 DBNDD1Q9H9R9 158 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 ZNF233A6NK53 670 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 CC2D2BQ6DHV5 1058 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 PRXQ9BXM0 1461 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 DIAPH2O60879 1101 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 SCG2P13521 617 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.6
FXR1-202ENST00000357559 NME3Q13232 169 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 E2F4Q16254 413 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 MDH1BQ5I0G3 518 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 RASSF3Q86WH2 238 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 EGFL8Q99944 293 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 YY1AP1Q9H869 796 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 PALD1Q9ULE6 856 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
FXR1-202ENST00000357559 PAMP19021 973 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 HOXA13P31271 388 aaPredicted RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 NBPF10Q6P3W6 841 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 RPF1Q9H9Y2 349 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 CHCHD3Q9NX63 227 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 SENP1Q9P0U3 644 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■□□□□ 8.8
FXR1-202ENST00000357559 SUPT3HO75486 399 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 NFX1Q12986 1120 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 RECQLP46063 649 aaPredicted RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 DHX9Q08211 1270 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 FAM47EQ6ZV65 393 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 CRLF3Q8IUI8 442 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 DNAJC7Q99615 494 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 SUN2Q9UH99 717 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 NRBP1Q9UHY1 535 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 ARHGAP26Q9UNA1 814 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 SOWAHDA6NJG2 315 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 SYCP2LQ5T4T6 812 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 ZBTB40Q9NUA8 1239 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 STX18Q9P2W9 335 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 UBA6A0AVT1 1052 aaPredicted RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 PIK3R2O00459 728 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 AP1B1Q10567 949 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 SPTLC3Q9NUV7 552 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 USP19O94966 1318 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 TNKSO95271 1327 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 H0YCG3 227 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 TAC1P20366 129 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 ARL13BQ3SXY8 428 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 CAPN10Q9HC96 672 aa11.32□□□□□ -0.6
FXR1-202ENST00000357559 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 NOVA2Q9UNW9 492 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 KPNA2P52292 529 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 GEMIN8Q9NWZ8 242 aaKnown RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 KLHL8Q9P2G9 620 aaPredicted RBP11.32□□□□□ -0.6
FXR1-202ENST00000357559 BTBD18B2RXH4 712 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 PCYT1AP49585 367 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 UBE2SQ16763 222 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 DNAJC10Q8IXB1 793 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 TBC1D22AQ8WUA7 517 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 CHAMP1Q96JM3 812 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 DPYSL4O14531 572 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 BRD1O95696 1058 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 SH3BGRP55822 239 aaPredicted RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 OCA2Q04671 838 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 ULK4Q96C45 1275 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 ACCSQ96QU6 501 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 DDX28Q9NUL7 540 aaKnown RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 PPARGC1AQ9UBK2 798 aaKnown RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 TMPRSS15P98073 1019 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 MRPL28Q13084 256 aaKnown RBP11.31□□□□□ -0.6
FXR1-202ENST00000357559 DMC1Q14565 340 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 PLEKHM3Q6ZWE6 761 aa11.31□□□□□ -0.6
FXR1-202ENST00000357559 DDIASQ8IXT1 998 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms