RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 KCTD1Q719H9 257 aa15.99■□□□□ 0.15
CHD4-201ENST00000357008 PIP4K2CQ8TBX8 421 aa15.99■□□□□ 0.15
CHD4-201ENST00000357008 ABTB1Q969K4 478 aaPredicted RBP15.99■□□□□ 0.15
CHD4-201ENST00000357008 COA7Q96BR5 231 aa15.99■□□□□ 0.15
CHD4-201ENST00000357008 ATP10AO60312 1499 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 PI16Q6UXB8 463 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 FAM149B1Q96BN6 582 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 TMEM2Q9UHN6 1383 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 GMNCA6NCL1 334 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 NR1H3Q13133 447 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 FAM98CQ17RN3 349 aaKnown RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 CCDC144BQ3MJ40 725 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 UNC13DQ70J99 1090 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 PAGR1Q9BTK6 254 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 SLC5A4Q9NY91 659 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 RPAP1Q9BWH6 1393 aaPredicted RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 IL6STP40189 918 aaPredicted RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 BBS5Q8N3I7 341 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 TMEM60Q9H2L4 133 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 SNX24Q9Y343 169 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 CSADQ9Y600 493 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 KIF21AQ7Z4S6 1674 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 IFRD2Q12894 506 aaPredicted RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 NRBF2Q96F24 287 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 CALR3Q96L12 384 aaKnown RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 INTUQ9ULD6 942 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 PALM3A6NDB9 673 aaPredicted RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
CHD4-201ENST00000357008 GRAMD1BQ3KR37 738 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 SLC38A10Q9HBR0 1119 aa15.98■□□□□ 0.15
CHD4-201ENST00000357008 SPAG7O75391 227 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 CRLF3Q8IUI8 442 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 CCDC124Q96CT7 223 aaKnown RBP15.97■□□□□ 0.15
CHD4-201ENST00000357008 NUB1Q9Y5A7 615 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 ANGPTL3Q9Y5C1 460 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 KRT37O76014 449 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 SESTD1Q86VW0 696 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 PROM2Q8N271 834 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 GOLPH3LQ9H4A5 285 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 STK36Q9NRP7 1315 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 GYG2O15488 501 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 ATP6V1E2Q96A05 226 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 GINM1Q9NU53 330 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 ATP7BP35670 1465 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 UBXN2AP68543 259 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 SPOPLQ6IQ16 392 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 RNF169Q8NCN4 708 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 SAAL1Q96ER3 474 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 MXD3Q9BW11 206 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 UPF3AQ9H1J1 476 aaKnown RBP15.97■□□□□ 0.15
CHD4-201ENST00000357008 YEATS2Q9ULM3 1422 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 ADGRG1Q9Y653 693 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 PRPSAP2O60256 369 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 ABL1P00519 1130 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 SLC16A2P36021 539 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 TRIML2Q8N7C3 387 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 STOML1Q9UBI4 398 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 SERPINB13Q9UIV8 391 aa15.97■□□□□ 0.15
CHD4-201ENST00000357008 ABCA5Q8WWZ7 1642 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 CFLARO15519 480 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 EEF1B2P24534 225 aaKnown RBP15.96■□□□□ 0.15
CHD4-201ENST00000357008 PPP2R2AP63151 447 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 THOC5Q13769 683 aaKnown RBP15.96■□□□□ 0.15
CHD4-201ENST00000357008 USP17L2Q6R6M4 530 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 WDR75Q8IWA0 830 aaKnown RBP15.96■□□□□ 0.15
CHD4-201ENST00000357008 CFAP36Q96G28 342 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 CAV1Q03135 178 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 IQCB1Q15051 598 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 DEPDC1BQ8WUY9 529 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 ZNF408Q9H9D4 720 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 MAGOHP61326 146 aaKnown RBP15.96■□□□□ 0.15
CHD4-201ENST00000357008 MORC4Q8TE76 937 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 NUDCD1Q96RS6 583 aa15.96■□□□□ 0.15
CHD4-201ENST00000357008 DNAJC17Q9NVM6 304 aaKnown RBP15.96■□□□□ 0.15
CHD4-201ENST00000357008 TJP3O95049 919 aa15.96■□□□□ 0.14
CHD4-201ENST00000357008 TMED1Q13445 227 aa15.96■□□□□ 0.14
CHD4-201ENST00000357008 SPC25Q9HBM1 224 aa15.96■□□□□ 0.14
CHD4-201ENST00000357008 ANLNQ9NQW6 1124 aa15.96■□□□□ 0.14
CHD4-201ENST00000357008 A0A0G2JND7 137 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 GRID2IPA4D2P6 1211 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 HDLBPQ00341 1268 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 BEND6Q5SZJ8 279 aaPredicted RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 SPICE1Q8N0Z3 855 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 SAYSD1Q9NPB0 183 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 RASA4BC9J798 803 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 RASA4O43374 803 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 USP14P54578 494 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 ZC3H18Q86VM9 953 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 DGKHQ86XP1 1220 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 CPSF1Q10570 1443 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 BMP3P12645 472 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 TFAMQ00059 246 aaKnown RBP15.95■□□□□ 0.14
CHD4-201ENST00000357008 EXOC8Q8IYI6 725 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 OSBPL9Q96SU4 736 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 CYTH2Q99418 400 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 USP27XA6NNY8 438 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 ZBED1O96006 694 aa15.95■□□□□ 0.14
CHD4-201ENST00000357008 MDM2Q00987 491 aaPredicted RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms