RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 MED4Q9NPJ6 270 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 SERPING1P05155 500 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 ABCD1P33897 745 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 LIG3P49916 1009 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 STX1BP61266 288 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 COG7P83436 770 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 OR6B3Q8NGW1 331 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 SPDL1Q96EA4 605 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 PCDHA13Q9Y5I0 950 aa14.27□□□□□ -0.13
SCN8A-202ENST00000355133 APBA1Q02410 837 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 HSPH1Q92598 858 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 RESTQ13127 1097 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 SEPT2Q15019 361 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 RABGGTAQ92696 567 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 CPVLQ9H3G5 476 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 JRKLQ9Y4A0 524 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 FAM196BA6NMK8 535 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 SNAP23O00161 211 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 LIFRP42702 1097 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 EPHB1P54762 984 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 TRMT2AQ8IZ69 625 aaKnown RBP14.26□□□□□ -0.13
SCN8A-202ENST00000355133 SPZ1Q9BXG8 430 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 NDST4Q9H3R1 872 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 RAVER2Q9HCJ3 691 aaKnown RBP14.26□□□□□ -0.13
SCN8A-202ENST00000355133 CPSF2Q9P2I0 782 aaKnown RBP14.26□□□□□ -0.13
SCN8A-202ENST00000355133 CYP27A1Q02318 531 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 CATSPER4Q7RTX7 472 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 BANK1Q8NDB2 785 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 STRBPQ96SI9 672 aaKnown RBP14.26□□□□□ -0.13
SCN8A-202ENST00000355133 NCAPGQ9BPX3 1015 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 TLK1Q9UKI8 766 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 PCDHA6Q9UN73 950 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 PCDHA8Q9Y5H6 950 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 H7C1W4 665 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 MICAL1Q8TDZ2 1067 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 AP1M1Q9BXS5 423 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 TDRD3Q9H7E2 651 aaKnown RBP14.26□□□□□ -0.13
SCN8A-202ENST00000355133 KDM5DQ9BY66 1539 aa14.26□□□□□ -0.13
SCN8A-202ENST00000355133 GCC2Q8IWJ2 1684 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 SUN1O94901 812 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 TTC4O95801 387 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ELF1P32519 619 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 DHX9Q08211 1270 aaKnown RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ENOX1Q8TC92 643 aaKnown RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ZNF335Q9H4Z2 1342 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 EPHB4P54760 987 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ZBED6P86452 979 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 RC3H1Q5TC82 1133 aaKnown RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ZNF449Q6P9G9 518 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 SPDYE1Q8NFV5 336 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 HAUS8Q9BT25 410 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 PIM2Q9P1W9 311 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 PRDX5P30044 214 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 CCT5P48643 541 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 SURF1Q15526 300 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ZNF394Q53GI3 561 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 C10orf76Q5T2E6 689 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 PPP1R2P3Q6NXS1 205 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 UBE2Q2Q8WVN8 375 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 DACT3Q96B18 629 aaPredicted RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 IRAK4Q9NWZ3 460 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ADGBQ8N7X0 1667 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 TOM1L1O75674 476 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ASNSP08243 561 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 RWDD4Q6NW29 188 aaKnown RBP14.25□□□□□ -0.13
SCN8A-202ENST00000355133 DCAF4Q8WV16 495 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 GJB4Q9NTQ9 266 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 RPS6KA4O75676 772 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 MT-ND3P03897 115 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 SPOPLQ6IQ16 392 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 BRIP1Q9BX63 1249 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ZHX2Q9Y6X8 837 aa14.25□□□□□ -0.13
SCN8A-202ENST00000355133 ARHGEF37A1IGU5 675 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 ERICH1Q86X53 443 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCN8A-202ENST00000355133 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 PNMA3Q9UL41 463 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 NEDD4P46934 1319 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 MTMR1Q13613 665 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 BBS9Q3SYG4 887 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 SIRT2Q8IXJ6 389 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 SYNE4Q8N205 404 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 PBKQ96KB5 322 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 TTC1Q99614 292 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 DNAJC17Q9NVM6 304 aaKnown RBP14.24□□□□□ -0.13
SCN8A-202ENST00000355133 G3BP2Q9UN86 482 aaKnown RBP14.24□□□□□ -0.13
SCN8A-202ENST00000355133 POLIQ9UNA4 740 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 NVLO15381 856 aaKnown RBP14.24□□□□□ -0.13
SCN8A-202ENST00000355133 SMIM24O75264 130 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 CUL4AQ13619 759 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 PCGF5Q86SE9 256 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 DEPDC1BQ8WUY9 529 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 STAG1Q8WVM7 1258 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 USH1CQ9Y6N9 552 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.24□□□□□ -0.13
SCN8A-202ENST00000355133 ECE2O60344 883 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 KRT10P13645 584 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 TBC1D10CQ8IV04 446 aa14.24□□□□□ -0.13
SCN8A-202ENST00000355133 VSTM4Q8IW00 320 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms