RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 C2orf54Q08AI8 447 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 TCP10Q12799 353 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 KCNH2Q12809 1159 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 RBM26Q5T8P6 1007 aaKnown RBP17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 SH3BP5LQ7L8J4 393 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 KIAA0825Q8IV33 1275 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 GANQ9H2C0 597 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 FBXL5Q9UKA1 691 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 NPHP3-ACAD11A0A0J9YXS1 232 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 GRID2IPA4D2P6 1211 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 POTEFA5A3E0 1075 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 NDUFB10O96000 172 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 POTEIP0CG38 1075 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 MUTP22033 750 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 NR2F2P24468 414 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 STAT3P40763 770 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 KLHL30Q0D2K2 578 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 KLHDC7AQ5VTJ3 777 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 POTEGQ6S5H5 508 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 POTEEQ6S8J3 1075 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 LEKR1Q6ZMV7 388 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 COL23A1Q86Y22 540 aaPredicted RBP17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 AENQ8WTP8 325 aaKnown RBP17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 AKT1S1Q96B36 256 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 LENG9Q96B70 501 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 PLCD4Q9BRC7 762 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 TLR10Q9BXR5 811 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 FGFBP2Q9BYJ0 223 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 DBNDD1Q9H9R9 158 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 HDAC9Q9UKV0 1011 aa17.01■□□□□ 0.31
TNFSF13-202ENST00000349228 CES2O00748 559 aa17■□□□□ 0.31
TNFSF13-202ENST00000349228 EYA4O95677 639 aa17■□□□□ 0.31
TNFSF13-202ENST00000349228 AFPP02771 609 aaKnown RBP17■□□□□ 0.31
TNFSF13-202ENST00000349228 IVLP07476 585 aa17■□□□□ 0.31
TNFSF13-202ENST00000349228 IFI16Q16666 785 aaKnown RBP17■□□□□ 0.31
TNFSF13-202ENST00000349228 SELENOOQ9BVL4 669 aa17■□□□□ 0.31
TNFSF13-202ENST00000349228 ZHX3Q9H4I2 956 aa17■□□□□ 0.31
TNFSF13-202ENST00000349228 TYW1Q9NV66 732 aaKnown RBP17■□□□□ 0.31
TNFSF13-202ENST00000349228 PCDHGC5Q9Y5F6 944 aa17■□□□□ 0.31
TNFSF13-202ENST00000349228 PLSCR1O15162 318 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 N4BP1O75113 896 aaKnown RBP16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 NAP1L1P55209 391 aaKnown RBP16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 IKQ13123 557 aaPredicted RBP16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 RAPGEF1Q13905 1077 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 ZSCAN26Q16670 478 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 NFRKBQ6P4R8 1299 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 TBC1D5Q92609 795 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 TUFT1Q9NNX1 390 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 GTPBP10A4D1E9 387 aaKnown RBP16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 ECE2O60344 883 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 EPHB4P54760 987 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 NNTQ13423 1086 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 NFIL3Q16649 462 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 EMBQ6PCB8 327 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 DRC1Q96MC2 740 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 OLFML3Q9NRN5 406 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 SALL4Q9UJQ4 1053 aa16.99■□□□□ 0.31
TNFSF13-202ENST00000349228 MSH4O15457 936 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 RNF40O75150 1001 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 TBCAO75347 108 aaKnown RBP16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 SYF2O95926 243 aaKnown RBP16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 MMP10P09238 476 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 XRCC5P13010 732 aaKnown RBP16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 ZNF76P36508 570 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 GYS2P54840 703 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 PABPC4Q13310 644 aaKnown RBP eCLIP16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 SLC15A2Q16348 729 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 SFR1Q86XK3 245 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 LRRC1Q9BTT6 524 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 EHMT1Q9H9B1 1298 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 STIM2Q9P246 746 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 HERC5Q9UII4 1024 aaKnown RBP16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 VAV3Q9UKW4 847 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 ARFGEF1Q9Y6D6 1849 aa16.98■□□□□ 0.31
TNFSF13-202ENST00000349228 FAM86B1E9PN63 330 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 H0YIN7 160 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 EIF3DO15371 548 aaKnown RBP eCLIP16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 FAM86B2P0C5J1 330 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 EPB41P11171 864 aaKnown RBP16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 CAPN2P17655 700 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 PRKCIP41743 596 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 CACNB3P54284 484 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 EXOC3L4Q17RC7 722 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 CC2D2BQ6DHV5 1058 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 AFAP1L1Q8TED9 768 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 RABGAP1Q9Y3P9 1069 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 ATAD5Q96QE3 1844 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 ZC3H4Q9UPT8 1303 aaKnown RBP16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 PRPF6O94906 941 aaKnown RBP16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 PSMC6P62333 389 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 KIAA0753Q2KHM9 967 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 MEI1Q5TIA1 1274 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 ALS2CLQ60I27 953 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 FMNL3Q8IVF7 1028 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 IFT20Q8IY31 132 aa16.97■□□□□ 0.31
TNFSF13-202ENST00000349228 ANKRD13CQ8N6S4 541 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms