RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 SESTD1Q86VW0 696 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 SEPT1Q8WYJ6 367 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 AGO4Q9HCK5 861 aaKnown RBP15.6■□□□□ 0.09
TPM4-202ENST00000344824 IL23AQ9NPF7 189 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 LOXHD1Q8IVV2 1947 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 FAM205CA6NFA0 338 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 ZBBXA8MT70 800 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 ZNF365Q70YC5 407 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 NOSTRINQ8IVI9 506 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 TBCKQ8TEA7 893 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 ATP6V0A1Q93050 837 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 ZNF577Q9BSK1 485 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 FOXP1Q9H334 677 aaPredicted RBP15.6■□□□□ 0.09
TPM4-202ENST00000344824 AZI2Q9H6S1 392 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 ATP6V1DQ9Y5K8 247 aa15.6■□□□□ 0.09
TPM4-202ENST00000344824 NFASCO94856 1347 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 SIP14410 1827 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 EVPLQ92817 2033 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 GSTTP1A0A1W2PQM5 241 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 MEIS1O00470 390 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 CYP3A4P08684 503 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 ATP2B1P20020 1258 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 U2AF2P26368 475 aaKnown RBP eCLIP15.59■□□□□ 0.093e-8■□□□□ 9.8
TPM4-202ENST00000344824 ACTR2P61160 394 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 DNM1Q05193 864 aaKnown RBP15.59■□□□□ 0.09
TPM4-202ENST00000344824 EARS2Q5JPH6 523 aaKnown RBP15.59■□□□□ 0.09
TPM4-202ENST00000344824 TMEM240Q5SV17 173 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 GALNT17Q6IS24 598 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 PIK3AP1Q6ZUJ8 805 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 NIPA1Q7RTP0 329 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 BRAPQ7Z569 592 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 DAGLBQ8NCG7 672 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 CAGE1Q8TC20 777 aa15.59■□□□□ 0.09
TPM4-202ENST00000344824 DHX38Q92620 1227 aaKnown RBP15.59■□□□□ 0.09
TPM4-202ENST00000344824 FTOQ9C0B1 505 aaKnown RBP eCLIP15.59■□□□□ 0.09
TPM4-202ENST00000344824 IGLV3-22A0A075B6J6 115 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 CCDC194A0A1B0GVG4 234 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 PITPNM1O00562 1244 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 BACH1O14867 736 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 BAG4O95429 457 aaKnown RBP15.58■□□□□ 0.08
TPM4-202ENST00000344824 IGBP1P78318 339 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 CEBPZQ03701 1054 aaKnown RBP15.58■□□□□ 0.08
TPM4-202ENST00000344824 PTK7Q13308 1070 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 NONOQ15233 471 aaKnown RBP eCLIP15.58■□□□□ 0.082e-8■■■■■ 32.1
TPM4-202ENST00000344824 LRRC8DQ7L1W4 858 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 OTOP2Q7RTS6 562 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 RPUSD2Q8IZ73 545 aaKnown RBP15.58■□□□□ 0.08
TPM4-202ENST00000344824 FAM177A1Q8N128 213 aaPredicted RBP15.58■□□□□ 0.08
TPM4-202ENST00000344824 CRYGNQ8WXF5 182 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 CTAGE1Q96RT6 745 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 MTIF3Q9H2K0 278 aaKnown RBP15.58■□□□□ 0.08
TPM4-202ENST00000344824 SETD4Q9NVD3 440 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 TFIP11Q9UBB9 837 aaKnown RBP15.58■□□□□ 0.08
TPM4-202ENST00000344824 TRPC6Q9Y210 931 aa15.58■□□□□ 0.08
TPM4-202ENST00000344824 IPO5O00410 1097 aaKnown RBP15.57■□□□□ 0.08
TPM4-202ENST00000344824 TREHO43280 583 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 FGBP02675 491 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 CTSHP09668 335 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 PPFIA1Q13136 1202 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 HIC1Q14526 733 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 INF2Q27J81 1249 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 Q7L0L9 218 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 C16orf59Q7L2K0 433 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 KRT25Q7Z3Z0 450 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 AFAP1L1Q8TED9 768 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 TNFRSF25Q93038 417 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 WNT8BQ93098 351 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 GBP4Q96PP9 640 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 RNPEPQ9H4A4 650 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 SMARCAD1Q9H4L7 1026 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 ERAP1Q9NZ08 941 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 SAMM50Q9Y512 469 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 PTPRSQ13332 1948 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 MYO9BQ13459 2157 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 EMSYQ7Z589 1322 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 MICAL3Q7RTP6 2002 aa15.57■□□□□ 0.08
TPM4-202ENST00000344824 M0R2N6 131 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 CHMP2AO43633 222 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 SLC34A2O95436 690 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 TDP2O95551 362 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 IQCF3P0C7M6 154 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 GNAT1P11488 350 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 CKBP12277 381 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 SELPP16109 830 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 THPOP40225 353 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 NBR1Q14596 966 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 LETM2Q2VYF4 491 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 TRMT1LQ7Z2T5 733 aaKnown RBP15.56■□□□□ 0.08
TPM4-202ENST00000344824 LMBR1Q8WVP7 490 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 FAM161BQ96MY7 647 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 GDPD2Q9HCC8 539 aa15.56■□□□□ 0.08
TPM4-202ENST00000344824 RBAK-RBAKDNI3L0D1 243 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 CCNE2O96020 404 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 ZNF618Q5T7W0 954 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 FAM160B1Q5W0V3 765 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 MIS18BP1Q6P0N0 1132 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 DEFB123Q8N688 67 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 GJA10Q969M2 543 aa15.55■□□□□ 0.08
TPM4-202ENST00000344824 ZNF396Q96N95 335 aaPredicted RBP15.55■□□□□ 0.08
TPM4-202ENST00000344824 PCYT2Q99447 389 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms