RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 KLRF2D3W0D1 207 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 GCOM1H8Y6P7 765 aaPredicted RBP18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 ZNF213O14771 459 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 PER2O15055 1255 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 POLR2MP0CAP2 368 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 DNAJB3Q8WWF6 145 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 SUSD6Q92537 303 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 MAD2L2Q9UI95 211 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 CDY2AQ9Y6F7 541 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 NRCAMQ92823 1304 aa18.97■□□□□ 0.63
NECTIN1-202ENST00000340882 PPFIA3O75145 1194 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 CD52P31358 61 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 NEDD9Q14511 834 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 CCDC178Q5BJE1 867 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 MARCH8Q5T0T0 291 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 ANKRD45Q5TZF3 282 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 CMTR2Q8IYT2 770 aaKnown RBP18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 PPP2R3CQ969Q6 453 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 PIGSQ96S52 555 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 ZNF215Q9UL58 517 aaPredicted RBP18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 FRMPD4Q14CM0 1322 aa18.96■□□□□ 0.63
NECTIN1-202ENST00000340882 PTPN21Q16825 1174 aa18.95■□□□□ 0.62
NECTIN1-202ENST00000340882 NAALADL2Q58DX5 795 aa18.95■□□□□ 0.62
NECTIN1-202ENST00000340882 TSHZ1Q6ZSZ6 1077 aa18.95■□□□□ 0.62
NECTIN1-202ENST00000340882 SAMD3Q8N6K7 520 aa18.95■□□□□ 0.62
NECTIN1-202ENST00000340882 ATP8B4Q8TF62 1192 aa18.95■□□□□ 0.62
NECTIN1-202ENST00000340882 PALM3A6NDB9 673 aaPredicted RBP18.94■□□□□ 0.62
NECTIN1-202ENST00000340882 PROB1E7EW31 1015 aa18.94■□□□□ 0.62
NECTIN1-202ENST00000340882 FOXK2Q01167 660 aa18.94■□□□□ 0.62
NECTIN1-202ENST00000340882 TAF2Q6P1X5 1199 aa18.94■□□□□ 0.62
NECTIN1-202ENST00000340882 TLE6Q9H808 572 aa18.94■□□□□ 0.62
NECTIN1-202ENST00000340882 MBLAC1A4D2B0 266 aaPredicted RBP18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 FIBPO43427 364 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 CYTH3O43739 400 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 ATF7P17544 494 aaPredicted RBP18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 SP100P23497 879 aaPredicted RBP18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 MARK3P27448 753 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 PPFIA1Q13136 1202 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 SEC23AQ15436 765 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 GRIK4Q16099 956 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 GNPTABQ3T906 1256 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 NPAS4Q8IUM7 802 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 RIPOR3Q96MK2 946 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 HCSTQ9UBK5 93 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 CDH22Q9UJ99 828 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 TUBE1Q9UJT0 475 aa18.93■□□□□ 0.62
NECTIN1-202ENST00000340882 WDR87Q6ZQQ6 2873 aa18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 ATP9AO75110 1047 aa18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 TCF7P36402 384 aaPredicted RBP18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 ERVFC1P60507 584 aa18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 MRPS6P82932 125 aaKnown RBP18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 APOL5Q9BWW9 433 aa18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 S1PR5Q9H228 398 aa18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 RIOX1Q9H6W3 641 aa18.92■□□□□ 0.62
NECTIN1-202ENST00000340882 GSTTP1A0A1W2PQM5 241 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 PRR23AA6NEV1 266 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 GALR2O43603 387 aaPredicted RBP18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 SDSP20132 328 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 TMEM62Q0P6H9 643 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 DUSP6Q16828 381 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 IFIT1BQ5T764 474 aaKnown RBP18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 CYB5R4Q7L1T6 521 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 MICAL1Q8TDZ2 1067 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 RILPL2Q969X0 211 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 FAM49AQ9H0Q0 323 aaPredicted RBP18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 IRF2BPLQ9H1B7 796 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 TMX1Q9H3N1 280 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 SMOC2Q9H3U7 446 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 PADI3Q9ULW8 664 aa18.91■□□□□ 0.62
NECTIN1-202ENST00000340882 STAM2O75886 525 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 IBSPP21815 317 aaPredicted RBP18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 IGBP1P78318 339 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 KCNC3Q14003 757 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 RSPH3Q86UC2 560 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 TMEM105Q8N8V8 129 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 SENP7Q9BQF6 1050 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 SENP2Q9HC62 589 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 TRPC6Q9Y210 931 aa18.9■□□□□ 0.62
NECTIN1-202ENST00000340882 CACNA1AO00555 2505 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 SCG2P13521 617 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 NT5C2P49902 561 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 SYCE2Q6PIF2 218 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 TICAM2Q86XR7 235 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 NEK1Q96PY6 1258 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 UBAC1Q9BSL1 405 aa18.89■□□□□ 0.61
NECTIN1-202ENST00000340882 KCNA2P16389 499 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 NBL1P41271 181 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 APOBRQ0VD83 1088 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 GRM4Q14833 912 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 TMEM266Q2M3C6 531 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 USP17L6PQ6QN14 398 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 CWC27Q6UX04 472 aaKnown RBP18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 PIBF1Q8WXW3 757 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 FTHL17Q9BXU8 183 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 EVPLQ92817 2033 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 GVINP1Q7Z2Y8 2422 aa18.88■□□□□ 0.61
NECTIN1-202ENST00000340882 PNMA6FA0A0J9YX94 578 aa18.87■□□□□ 0.61
NECTIN1-202ENST00000340882 FSCN2O14926 492 aa18.87■□□□□ 0.61
NECTIN1-202ENST00000340882 MGEA5O60502 916 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms