RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 KRT76Q01546 638 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 STXBP2Q15833 593 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 FAM26FQ5R3K3 315 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 C1orf186Q6ZWK4 172 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 CCDC186Q7Z3E2 898 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 CCDC65Q8IXS2 484 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 KCNF1Q9H3M0 494 aa23.58■■□□□ 1.36
VRK2-201ENST00000340157 MYH11P35749 1972 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 RSPH10B2B2RC85 870 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 EIF3JO75822 258 aaKnown RBP23.57■■□□□ 1.36
VRK2-201ENST00000340157 RSPH10BP0C881 870 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 CDK11BP21127 795 aaKnown RBP23.57■■□□□ 1.36
VRK2-201ENST00000340157 SP2Q02086 613 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 LRRC41Q15345 812 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 ANKRD40Q6AI12 368 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 GUF1Q8N442 669 aaKnown RBP23.57■■□□□ 1.36
VRK2-201ENST00000340157 SENP7Q9BQF6 1050 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 SAMM50Q9Y512 469 aa23.57■■□□□ 1.36
VRK2-201ENST00000340157 PLXNA1Q9UIW2 1896 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 NFASCO94856 1347 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 KRT18P05783 430 aaKnown RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 PPP1R2P41236 205 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 HUNKP57058 714 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 PTPN21Q16825 1174 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 GNPTABQ3T906 1256 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 CENPPQ6IPU0 288 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 SHCBP1Q8NEM2 672 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 SMCR8Q8TEV9 937 aaPredicted RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 MROH8Q9H579 483 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 ZSWIM4Q9H7M6 989 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 EFCC1Q9HA90 598 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 TBC1D7Q9P0N9 293 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 GOLGA6L6A8MZA4 724 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 ESPNB1AK53 854 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 WDR64B1ANS9 1081 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 ICAM3P32942 547 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 QARSP47897 775 aaKnown RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 JAK3P52333 1124 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 TPD52L1Q16890 204 aaPredicted RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 HERC4Q5GLZ8 1057 aaPredicted RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 ZNF746Q6NUN9 644 aaPredicted RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 ZSCAN30Q86W11 494 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 ANKRD13CQ8N6S4 541 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 GTF3C2Q8WUA4 911 aaPredicted RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 CDHR1Q96JP9 859 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 MMP19Q99542 508 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 POLD4Q9HCU8 107 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 ADD3Q9UEY8 706 aaKnown RBP23.56■■□□□ 1.36
VRK2-201ENST00000340157 ZKSCAN5Q9Y2L8 839 aa23.56■■□□□ 1.36
VRK2-201ENST00000340157 A0A1B0GTH6 734 aa23.55■■□□□ 1.36
VRK2-201ENST00000340157 CBFA2T2O43439 604 aa23.55■■□□□ 1.36
VRK2-201ENST00000340157 LYPLA2O95372 231 aa23.55■■□□□ 1.36
VRK2-201ENST00000340157 SFNP31947 248 aa23.55■■□□□ 1.36
VRK2-201ENST00000340157 ARID2Q68CP9 1835 aa23.54■■□□□ 1.36
VRK2-201ENST00000340157 GPRC5AQ8NFJ5 357 aa23.54■■□□□ 1.36
VRK2-201ENST00000340157 TRIM47Q96LD4 638 aa23.54■■□□□ 1.36
VRK2-201ENST00000340157 KCTD2Q14681 263 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 ARID5BQ14865 1188 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 TMC6Q7Z403 805 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 SFR1Q86XK3 245 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 RDM1Q8NG50 284 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 SRRTQ9BXP5 876 aaKnown RBP23.53■■□□□ 1.36
VRK2-201ENST00000340157 JPH1Q9HDC5 661 aaPredicted RBP23.53■■□□□ 1.36
VRK2-201ENST00000340157 LIMA1Q9UHB6 759 aaKnown RBP23.53■■□□□ 1.36
VRK2-201ENST00000340157 MYH9P35579 1960 aaKnown RBP23.53■■□□□ 1.36
VRK2-201ENST00000340157 BICDL2A1A5D9 508 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 CASP5P51878 434 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 NR1I3Q14994 352 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 KRT31Q15323 416 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 TCP11X2Q5H9J9 407 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 WDR78Q5VTH9 848 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 SEPT14Q6ZU15 432 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 FILIP1Q7Z7B0 1213 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 RASAL3Q86YV0 1011 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 ZHX3Q9H4I2 956 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 MORF4L1Q9UBU8 362 aa23.53■■□□□ 1.36
VRK2-201ENST00000340157 TMEM150BA6NC51 233 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 LRRC10BA6NIK2 292 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 KCNJ18B7U540 433 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 SORBS3O60504 671 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 KCNJ12Q14500 433 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 VSTM4Q8IW00 320 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 C4orf19Q8IY42 314 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 MYOCDQ8IZQ8 938 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 SCFD1Q8WVM8 642 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 EEF2KMTQ96G04 330 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 THAP9Q9H5L6 903 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 RRAGDQ9NQL2 400 aaPredicted RBP23.52■■□□□ 1.36
VRK2-201ENST00000340157 SLC9A2Q9UBY0 812 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 DBR1Q9UK59 544 aaKnown RBP23.52■■□□□ 1.36
VRK2-201ENST00000340157 PCDHA10Q9Y5I2 948 aa23.52■■□□□ 1.36
VRK2-201ENST00000340157 DCAF8L1A6NGE4 600 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 PSMC5P62195 406 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 ZCWPW2Q504Y3 356 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 SMAP1Q8IYB5 467 aaPredicted RBP23.51■■□□□ 1.35
VRK2-201ENST00000340157 CSGALNACT2Q8N6G5 542 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 PASKQ96RG2 1323 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 TEX33O43247 280 aa23.51■■□□□ 1.35
VRK2-201ENST00000340157 GCLCP48506 637 aaPredicted RBP23.51■■□□□ 1.35
VRK2-201ENST00000340157 RARRES1P49788 294 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms