RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 PCDHB6Q9Y5E3 794 aa23.11■■□□□ 1.29
MRPL40-201ENST00000333130 TRIP12Q14669 1992 aaPredicted RBP23.1■■□□□ 1.29
MRPL40-201ENST00000333130 PDXDC2PQ6P474 469 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 HAS1Q92839 578 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 IPO9Q96P70 1041 aaKnown RBP23.1■■□□□ 1.29
MRPL40-201ENST00000333130 UNC45AQ9H3U1 944 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.1■■□□□ 1.29
MRPL40-201ENST00000333130 HDAC6Q9UBN7 1215 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 GTF2IRD1Q9UHL9 959 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 PCDHA12Q9UN75 941 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 TRPC6Q9Y210 931 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 TELO2Q9Y4R8 837 aa23.1■■□□□ 1.29
MRPL40-201ENST00000333130 B4GALT4O60513 344 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 MARK3P27448 753 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 PPP2R5CQ13362 524 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 ZNF174Q15697 407 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 CKAP2LQ8IYA6 745 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 AFAP1L1Q8TED9 768 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 GJA10Q969M2 543 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 MTMR9Q96QG7 549 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 PDLIM7Q9NR12 457 aa23.09■■□□□ 1.29
MRPL40-201ENST00000333130 IGKV6D-21A0A0A0MT36 114 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 C17orf102A2RUQ5 167 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 CD4P01730 458 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 OR52Z1P0C646 297 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 SMIM10L2AP0DMW4 78 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 SMIM10L2BP0DMW5 78 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 FAAP100Q0VG06 881 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 PTGISQ16647 500 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 TMEM266Q2M3C6 531 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 SWSAP1Q6NVH7 229 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 CCDC60Q8IWA6 550 aaPredicted RBP23.08■■□□□ 1.29
MRPL40-201ENST00000333130 CCDC155Q8N6L0 562 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 C4orf32Q8N8J7 132 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 ATP6V0A1Q93050 837 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 TMEM60Q9H2L4 133 aa23.08■■□□□ 1.29
MRPL40-201ENST00000333130 ZMYND8Q9ULU4 1186 aaPredicted RBP23.08■■□□□ 1.29
MRPL40-201ENST00000333130 CIZ1Q9ULV3 898 aaPredicted RBP23.08■■□□□ 1.29
MRPL40-201ENST00000333130 NRCAMQ92823 1304 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 LAD1O00515 517 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 DKC1O60832 514 aaKnown RBP eCLIP23.07■■□□□ 1.28
MRPL40-201ENST00000333130 RAG1P15918 1043 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 TXKP42681 527 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 NUCB2P80303 420 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 PPFIA1Q13136 1202 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 FAM173BQ6P4H8 233 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 B3GNT9Q6UX72 402 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 FAM167AQ96KS9 214 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 PCYT2Q99447 389 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 LBHD1Q9BQE6 289 aaPredicted RBP23.07■■□□□ 1.28
MRPL40-201ENST00000333130 TRPV6Q9H1D0 765 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 TTC12Q9H892 705 aaPredicted RBP23.07■■□□□ 1.28
MRPL40-201ENST00000333130 TRMT13Q9NUP7 481 aaKnown RBP23.07■■□□□ 1.28
MRPL40-201ENST00000333130 GABBR1Q9UBS5 961 aa23.07■■□□□ 1.28
MRPL40-201ENST00000333130 TCHHQ07283 1943 aa23.06■■□□□ 1.28
MRPL40-201ENST00000333130 FOXD4L5Q5VV16 416 aaPredicted RBP23.06■■□□□ 1.28
MRPL40-201ENST00000333130 FOXD4L4Q8WXT5 416 aaPredicted RBP23.06■■□□□ 1.28
MRPL40-201ENST00000333130 RAB34Q9BZG1 259 aa23.06■■□□□ 1.28
MRPL40-201ENST00000333130 VAV3Q9UKW4 847 aa23.06■■□□□ 1.28
MRPL40-201ENST00000333130 IGSF9BQ9UPX0 1349 aa23.06■■□□□ 1.28
MRPL40-201ENST00000333130 POTEB3A0JP26 581 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 RRN3P2A6NIE6 340 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 KIAA0355O15063 1070 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 BMP15O95972 392 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 SYN1P17600 705 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 NCAPH2Q6IBW4 605 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 GDF6Q6KF10 455 aaPredicted RBP23.05■■□□□ 1.28
MRPL40-201ENST00000333130 POTEBQ6S5H4 581 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 PPP1R13LQ8WUF5 828 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 RNPEPQ9H4A4 650 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 CEP131Q9UPN4 1083 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 MAFBQ9Y5Q3 323 aaPredicted RBP23.05■■□□□ 1.28
MRPL40-201ENST00000333130 LTBP2Q14767 1821 aa23.05■■□□□ 1.28
MRPL40-201ENST00000333130 H0YGN5 161 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 HBP1O60381 514 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 ATP2C1P98194 919 aaPredicted RBP23.04■■□□□ 1.28
MRPL40-201ENST00000333130 PTGDRQ13258 359 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 BFSP2Q13515 415 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 PLCB4Q15147 1175 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 ATP8B4Q8TF62 1192 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 HIPK3Q9H422 1215 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 TBX21Q9UL17 535 aa23.04■■□□□ 1.28
MRPL40-201ENST00000333130 PRPHP41219 470 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 SPIRE1Q08AE8 756 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 GRIK4Q16099 956 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 PRPF38BQ5VTL8 546 aaKnown RBP23.03■■□□□ 1.28
MRPL40-201ENST00000333130 CAGE1Q8TC20 777 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 NEK9Q8TD19 979 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 BBXQ8WY36 941 aaPredicted RBP23.03■■□□□ 1.28
MRPL40-201ENST00000333130 FTOQ9C0B1 505 aaKnown RBP eCLIP23.03■■□□□ 1.28
MRPL40-201ENST00000333130 SETD4Q9NVD3 440 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 MORC2Q9Y6X9 1032 aaPredicted RBP23.03■■□□□ 1.28
MRPL40-201ENST00000333130 COL1A2P08123 1366 aa23.03■■□□□ 1.28
MRPL40-201ENST00000333130 P4HBP07237 508 aaKnown RBP23.02■■□□□ 1.28
MRPL40-201ENST00000333130 PSMC5P62195 406 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 PTK7Q13308 1070 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 PTPAQ15257 358 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 EPHA7Q15375 998 aa23.02■■□□□ 1.28
MRPL40-201ENST00000333130 SF3A1Q15459 793 aaKnown RBP23.02■■□□□ 1.28
MRPL40-201ENST00000333130 ERMNQ8TAM6 284 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms