RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 IGKV6D-21A0A0A0MT36 114 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 RRN3P2A6NIE6 340 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 CCNE2O96020 404 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 PSAPP07602 524 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 CSF2RAP15509 400 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 MARK3P27448 753 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 CCL23P55773 120 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 ZNF200P98182 395 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-201ENST00000332345 GNL2Q13823 731 aaKnown RBP15.84■□□□□ 0.13
LIMS1-201ENST00000332345 EARS2Q5JPH6 523 aaKnown RBP15.84■□□□□ 0.13
LIMS1-201ENST00000332345 SWSAP1Q6NVH7 229 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 FAM20AQ96MK3 541 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 PCYT2Q99447 389 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
LIMS1-201ENST00000332345 SETD4Q9NVD3 440 aa15.84■□□□□ 0.13
LIMS1-201ENST00000332345 TRIOBPQ9H2D6 2365 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 WDR64B1ANS9 1081 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 TBX3O15119 743 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 BAG4O95429 457 aaKnown RBP15.83■□□□□ 0.12
LIMS1-201ENST00000332345 HOXC8P31273 242 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 SFNP31947 248 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 AFAP1L1Q8TED9 768 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 CTAGE1Q96RT6 745 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 ZNF302Q9NR11 478 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
LIMS1-201ENST00000332345 POTEB3A0JP26 581 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 TREHO43280 583 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 SLC37A4O43826 429 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 PSMD10O75832 226 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 PARNO95453 639 aaKnown RBP15.82■□□□□ 0.12
LIMS1-201ENST00000332345 IQCF3P0C7M6 154 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 GJB2P29033 226 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 RFC2P35250 354 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 JAK3P52333 1124 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 PPFIA1Q13136 1202 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 HIC1Q14526 733 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 PDXDC2PQ6P474 469 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 POTEBQ6S5H4 581 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 SERINC5Q86VE9 423 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 CKAP2LQ8IYA6 745 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 SLFN12Q8IYM2 578 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 RDM1Q8NG50 284 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 ETNPPLQ8TBG4 499 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 IL23AQ9NPF7 189 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 DISC1Q9NRI5 854 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 TRPC6Q9Y210 931 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 UMODL1Q5DID0 1318 aa15.82■□□□□ 0.12
LIMS1-201ENST00000332345 FAM205CA6NFA0 338 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 HBP1O60381 514 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 CKBP12277 381 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 SELPP16109 830 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 ADAM17P78536 824 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 RBL2Q08999 1139 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 PLCB4Q15147 1175 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 SHHQ15465 462 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 GRIK4Q16099 956 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 CCDC60Q8IWA6 550 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-201ENST00000332345 LMBR1Q8WVP7 490 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 SCLYQ96I15 445 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 WNT8AQ9H1J5 351 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 UNC45AQ9H3U1 944 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 KCNMB3Q9NPA1 279 aa15.81■□□□□ 0.12
LIMS1-201ENST00000332345 MAFBQ9Y5Q3 323 aaPredicted RBP15.81■□□□□ 0.12
LIMS1-201ENST00000332345 H3BQV1 296 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 CHMP2AO43633 222 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 FGBP02675 491 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 PFKMP08237 780 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 INSRRP14616 1297 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 THPOP40225 353 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 EPHB4P54760 987 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 CUL4AQ13619 759 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 LRIT3Q3SXY7 679 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 TMEM240Q5SV17 173 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 PSRC1Q6PGN9 363 aaPredicted RBP15.8■□□□□ 0.12
LIMS1-201ENST00000332345 ZNF365Q70YC5 407 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 MIER3Q7Z3K6 550 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 NOSTRINQ8IVI9 506 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 ATP8B4Q8TF62 1192 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 DHX38Q92620 1227 aaKnown RBP15.8■□□□□ 0.12
LIMS1-201ENST00000332345 GJA10Q969M2 543 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 GABBR1Q9UBS5 961 aa15.8■□□□□ 0.12
LIMS1-201ENST00000332345 WDR81Q562E7 1941 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 CAND2O75155 1236 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 RPLP2P05387 115 aaKnown RBP15.79■□□□□ 0.12
LIMS1-201ENST00000332345 ACRP10323 421 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 ATP2B1P20020 1258 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 U2AF2P26368 475 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIMS1-201ENST00000332345 IGBP1P78318 339 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 CALCRLQ16602 461 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 TRIM71Q2Q1W2 868 aaKnown RBP15.79■□□□□ 0.12
LIMS1-201ENST00000332345 ZNF484Q5JVG2 852 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 C9orf50Q5SZB4 431 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 LARP1BQ659C4 914 aaKnown RBP15.79■□□□□ 0.12
LIMS1-201ENST00000332345 TAF2Q6P1X5 1199 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 LRRC8DQ7L1W4 858 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 C16orf59Q7L2K0 433 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 RSPH3Q86UC2 560 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 BBXQ8WY36 941 aaPredicted RBP15.79■□□□□ 0.12
LIMS1-201ENST00000332345 HAS1Q92839 578 aa15.79■□□□□ 0.12
LIMS1-201ENST00000332345 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms