RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 DRP2Q13474 957 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 NEDD9Q14511 834 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 CDC37Q16543 378 aaPredicted RBP9.53□□□□□ -0.88
LIMK2-201ENST00000331728 C10orf76Q5T2E6 689 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 C16orf86Q6ZW13 317 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 USP38Q8NB14 1042 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 CTNNBL1Q8WYA6 563 aaPredicted RBP9.53□□□□□ -0.88
LIMK2-201ENST00000331728 SYN2Q92777 582 aaPredicted RBP9.53□□□□□ -0.88
LIMK2-201ENST00000331728 PACSIN1Q9BY11 444 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 DDX47Q9H0S4 455 aaKnown RBP9.53□□□□□ -0.88
LIMK2-201ENST00000331728 GOLPH3Q9H4A6 298 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 CD248Q9HCU0 757 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 AMFRQ9UKV5 643 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 PNMA6FA0A0J9YX94 578 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 NKRFO15226 690 aaKnown RBP eCLIP9.53□□□□□ -0.88
LIMK2-201ENST00000331728 FAM13AO94988 1023 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 COBLL1Q53SF7 1204 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 PPP4R3AQ6IN85 833 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 CCDC13Q8IYE1 715 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 CACNA2D3Q8IZS8 1091 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 LINC00116Q8NCU8 138 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 NUDT12Q9BQG2 462 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 ACTR5Q9H9F9 607 aaPredicted RBP9.53□□□□□ -0.88
LIMK2-201ENST00000331728 NARFQ9UHQ1 456 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 SALL4Q9UJQ4 1053 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 GGA2Q9UJY4 613 aa9.53□□□□□ -0.88
LIMK2-201ENST00000331728 NPHP3-ACAD11A0A0J9YXS1 232 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 SPDYE3A6NKU9 549 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 SRRM3A6NNA2 597 aaPredicted RBP9.52□□□□□ -0.88
LIMK2-201ENST00000331728 ABCB4P21439 1286 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 NF2P35240 595 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 SLC35G1Q2M3R5 365 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 EMC10Q5UCC4 262 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 PPP4R3CPQ6ZMV5 832 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 KCNK18Q7Z418 384 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 CEP57Q86XR8 500 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 C1orf131Q8NDD1 294 aaKnown RBP9.52□□□□□ -0.88
LIMK2-201ENST00000331728 GLT8D2Q9H1C3 349 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 RASAL2Q9UJF2 1139 aa9.52□□□□□ -0.88
LIMK2-201ENST00000331728 CICQ96RK0 1608 aaPredicted RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 PDHBP11177 359 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 ACTN1P12814 892 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 STAT1P42224 750 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 PPP4CP60510 307 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 GRAPQ13588 217 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 PRR16Q569H4 304 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 SLC10A5Q5PT55 438 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 ARHGAP27Q6ZUM4 889 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 KCTD1Q719H9 257 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 ADAT2Q7Z6V5 191 aaKnown RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 CLEC10AQ8IUN9 316 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 GRAPLQ8TC17 118 aaPredicted RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 DYDC1Q8WWB3 177 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 CCNL1Q9UK58 526 aaPredicted RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 NOVA2Q9UNW9 492 aaKnown RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 NOC2LQ9Y3T9 749 aaKnown RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 LRP5O75197 1615 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 CCDC188H7C350 402 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 TTLL1O95922 423 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 SMARCA1P28370 1054 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 HS2ST1Q7LGA3 356 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 HOOK3Q86VS8 718 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 OR2W6PQ8NHA6 318 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 TBC1D22AQ8WUA7 517 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 ZKSCAN4Q969J2 545 aaPredicted RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 CYFIP2Q96F07 1278 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 SCLT1Q96NL6 688 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 RAB17Q9H0T7 212 aa9.52□□□□□ -0.89
LIMK2-201ENST00000331728 METTL14Q9HCE5 456 aaKnown RBP9.52□□□□□ -0.89
LIMK2-201ENST00000331728 TMEM110-MUSTN1A8MSY1 372 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 MEIS1O00470 390 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 KCNMA1Q12791 1236 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 ITGB3BPQ13352 177 aaPredicted RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 MEI1Q5TIA1 1274 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 DDX42Q86XP3 938 aaKnown RBP eCLIP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 PROCA1Q8NCQ7 364 aaPredicted RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 MTMR9Q96QG7 549 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 NAP1L3Q99457 506 aaPredicted RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 SLC40A1Q9NP59 571 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 DONSONQ9NYP3 566 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 GCNT4Q9P109 453 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 SWAP70Q9UH65 585 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 FBXL5Q9UKA1 691 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 CEP83Q9Y592 693 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 ANKRD36CQ5JPF3 1778 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 POTEFA5A3E0 1075 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 RIMBP2O15034 1052 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 SART1O43290 800 aaKnown RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 KIF1CO43896 1103 aaKnown RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 HSPA9P38646 679 aaKnown RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 CYP4A11Q02928 519 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 SNCBQ16143 134 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 FAM98CQ17RN3 349 aaKnown RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 GPATCH4Q5T3I0 446 aaKnown RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 GKAP1Q5VSY0 366 aaPredicted RBP9.51□□□□□ -0.89
LIMK2-201ENST00000331728 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
LIMK2-201ENST00000331728 PPP1R18Q6NYC8 613 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms