RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 FGFR3P22607 806 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 SLC16A2P36021 539 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 ADCYAP1R1P41586 468 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 ACLYP53396 1101 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 IRX6P78412 446 aaPredicted RBP7.36□□□□□ -1.23
SMG1-201ENST00000330588 GRM4Q14833 912 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 TLR1Q15399 786 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 ERICH6BQ5W0A0 696 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 CASC1Q6TDU7 716 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 RNF207Q6ZRF8 634 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 RASGRP2Q7LDG7 609 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 MB21D2Q8IYB1 491 aaPredicted RBP7.36□□□□□ -1.23
SMG1-201ENST00000330588 ADGRF4Q8IZF3 695 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 ABHD17AQ96GS6 310 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 TMEM87BQ96K49 555 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 IWS1Q96ST2 819 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 LSG1Q9H089 658 aaKnown RBP7.36□□□□□ -1.23
SMG1-201ENST00000330588 RIOX1Q9H6W3 641 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 PRKAG2Q9UGJ0 569 aa7.36□□□□□ -1.23
SMG1-201ENST00000330588 ZHX1Q9UKY1 873 aaPredicted RBP7.36□□□□□ -1.23
SMG1-201ENST00000330588 RBM8AQ9Y5S9 174 aaKnown RBP7.36□□□□□ -1.23
SMG1-201ENST00000330588 SMCHD1A6NHR9 2005 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 MCM3APO60318 1980 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 A0A0U1RQG5 324 aaPredicted RBP7.35□□□□□ -1.23
SMG1-201ENST00000330588 NFIBO00712 420 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 ZBTB5O15062 677 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 KIAA0355O15063 1070 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 KPNA6O60684 536 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 CALM1P0DP23 149 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 CALM2P0DP24 149 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 CALM3P0DP25 149 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 LIFRP42702 1097 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 MAGEA10P43363 369 aaPredicted RBP7.35□□□□□ -1.23
SMG1-201ENST00000330588 HSD17B4P51659 736 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 RCAN1P53805 252 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 CTBSQ01459 385 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 TNFAIP2Q03169 654 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 TROAPQ12815 778 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 BAATQ14032 418 aaPredicted RBP7.35□□□□□ -1.23
SMG1-201ENST00000330588 NECTIN1Q15223 517 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 CDC37Q16543 378 aaPredicted RBP7.35□□□□□ -1.23
SMG1-201ENST00000330588 DUSP28Q4G0W2 176 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 TAPT1Q6NXT6 567 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 NSMFQ6X4W1 530 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 CYB5R4Q7L1T6 521 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 FBXO11Q86XK2 927 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 TDHQ8IZJ6 230 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 ZNF295-AS1Q8N0V1 137 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 SLC43A3Q8NBI5 491 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 IGDCC4Q8TDY8 1250 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 GLT1D1Q96MS3 346 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 LBHD1Q9BQE6 289 aaPredicted RBP7.35□□□□□ -1.23
SMG1-201ENST00000330588 LZTS2Q9BRK4 669 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 ZKSCAN3Q9BRR0 538 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 SPZ1Q9BXG8 430 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 AMNQ9BXJ7 453 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 JMJD4Q9H9V9 463 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 PDLIM7Q9NR12 457 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 MAD2L2Q9UI95 211 aa7.35□□□□□ -1.23
SMG1-201ENST00000330588 PTPDC1A2A3K4 754 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 DCDC2CA8MYV0 355 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 KLRF2D3W0D1 207 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 IFIT3O14879 490 aaKnown RBP7.34□□□□□ -1.23
SMG1-201ENST00000330588 CTAGE5O15320 804 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 ADCY6O43306 1168 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 PGK1P00558 417 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 CLTBP09497 229 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 BMP4P12644 408 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 ATP4AP20648 1035 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 KIF5BP33176 963 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 MCM5P33992 734 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 GNAQP50148 359 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 CDK7P50613 346 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 RPS6P62753 249 aaKnown RBP7.34□□□□□ -1.23
SMG1-201ENST00000330588 WTAPQ15007 396 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 KCNA10Q16322 511 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 QRICH1Q2TAL8 776 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 CATIPQ7Z7H3 387 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 TLK2Q86UE8 772 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 RETREG2Q8NC44 543 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 C1orf216Q8TAB5 229 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 NSUN6Q8TEA1 469 aaKnown RBP7.34□□□□□ -1.23
SMG1-201ENST00000330588 SCFD2Q8WU76 684 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 AP5M1Q9H0R1 490 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 STARD7Q9NQZ5 370 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 MYH6P13533 1939 aa7.34□□□□□ -1.23
SMG1-201ENST00000330588 PNMA6FA0A0J9YX94 578 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ARVCFO00192 962 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 TLR3O15455 904 aaKnown RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 CDC45O75419 566 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 STAM2O75886 525 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ASGR1P07306 291 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 C6orf222P0C671 652 aaPredicted RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 ARAFP10398 606 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 CPT1AP50416 773 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 ANTXR2P58335 489 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 KRT32Q14532 448 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 FSCN1Q16658 493 aaKnown RBP7.33□□□□□ -1.24
SMG1-201ENST00000330588 TRIM60Q495X7 471 aa7.33□□□□□ -1.24
SMG1-201ENST00000330588 BRDTQ58F21 947 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms