RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 AIPL1Q9NZN9 384 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 ATAD5Q96QE3 1844 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 MEIS1O00470 390 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 TLR2O60603 784 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 KCNH2Q12809 1159 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 HDAC9Q9UKV0 1011 aa24.61■■□□□ 1.53
PNKP-201ENST00000322344 GAP43P17677 238 aa24.6■■□□□ 1.53
PNKP-201ENST00000322344 RRP1BQ14684 758 aaKnown RBP24.6■■□□□ 1.53
PNKP-201ENST00000322344 OSBPL9Q96SU4 736 aa24.6■■□□□ 1.53
PNKP-201ENST00000322344 EIF2AK1Q9BQI3 630 aaKnown RBP24.6■■□□□ 1.53
PNKP-201ENST00000322344 GANQ9H2C0 597 aa24.6■■□□□ 1.53
PNKP-201ENST00000322344 SUGCTQ9HAC7 445 aa24.6■■□□□ 1.53
PNKP-201ENST00000322344 GOPCQ9HD26 462 aa24.6■■□□□ 1.53
PNKP-201ENST00000322344 PLCB1Q9NQ66 1216 aa24.6■■□□□ 1.53
PNKP-201ENST00000322344 ARMCX3Q9UH62 379 aaPredicted RBP24.6■■□□□ 1.53
PNKP-201ENST00000322344 TBCAO75347 108 aaKnown RBP24.59■■□□□ 1.53
PNKP-201ENST00000322344 CHRNA5P30532 468 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 HOXA13P31271 388 aaPredicted RBP24.59■■□□□ 1.53
PNKP-201ENST00000322344 CASP5P51878 434 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 RASSF7Q02833 373 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 EXOC4Q96A65 974 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 METTL14Q9HCE5 456 aaKnown RBP24.59■■□□□ 1.53
PNKP-201ENST00000322344 TUFT1Q9NNX1 390 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 TYW1Q9NV66 732 aaKnown RBP24.59■■□□□ 1.53
PNKP-201ENST00000322344 PSD3Q9NYI0 1048 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 TMX2Q9Y320 296 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 RABGAP1Q9Y3P9 1069 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 IGLV3-22A0A075B6J6 115 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 RPL13P26373 211 aaKnown RBP24.59■■□□□ 1.53
PNKP-201ENST00000322344 ASIC2Q16515 512 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 CRACR2AQ9BSW2 395 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 EHMT1Q9H9B1 1298 aa24.59■■□□□ 1.53
PNKP-201ENST00000322344 SLC16A3O15427 465 aaKnown RBP24.58■■□□□ 1.53
PNKP-201ENST00000322344 PPIP5K2O43314 1243 aa24.58■■□□□ 1.53
PNKP-201ENST00000322344 AFPP02771 609 aaKnown RBP24.58■■□□□ 1.53
PNKP-201ENST00000322344 SLC18A3Q16572 532 aa24.58■■□□□ 1.53
PNKP-201ENST00000322344 HSP90B2PQ58FF3 399 aa24.58■■□□□ 1.53
PNKP-201ENST00000322344 TAF3Q5VWG9 929 aa24.58■■□□□ 1.53
PNKP-201ENST00000322344 MED4Q9NPJ6 270 aa24.58■■□□□ 1.53
PNKP-201ENST00000322344 RAPGEF1Q13905 1077 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 GRIPAP1Q4V328 841 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 FAM71BQ8TC56 605 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 BHMT2Q9H2M3 363 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 OLFML3Q9NRN5 406 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 RNF216Q9NWF9 866 aaPredicted RBP24.57■■□□□ 1.52
PNKP-201ENST00000322344 RNF14Q9UBS8 474 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 YDJCA8MPS7 323 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 C2orf54Q08AI8 447 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 SPICE1Q8N0Z3 855 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 DRC1Q96MC2 740 aa24.57■■□□□ 1.52
PNKP-201ENST00000322344 GCOM1H8Y6P7 765 aaPredicted RBP24.56■■□□□ 1.52
PNKP-201ENST00000322344 POLR2MP0CAP2 368 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 MYBP10242 640 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 MUTP22033 750 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 HOXD13P35453 343 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 PAFAH1B1P43034 410 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 CYP4A11Q02928 519 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 KLHL30Q0D2K2 578 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 CCDC181Q5TID7 509 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 CHURC1Q8WUH1 139 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 FAM151AQ8WW52 585 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 BZW2Q9Y6E2 419 aaKnown RBP24.56■■□□□ 1.52
PNKP-201ENST00000322344 EP400Q96L91 3159 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 SPDYE2BA6NHP3 402 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 LRRIQ3A6PVS8 624 aaPredicted RBP24.56■■□□□ 1.52
PNKP-201ENST00000322344 PRPF6O94906 941 aaKnown RBP24.56■■□□□ 1.52
PNKP-201ENST00000322344 SPDYE6P0CI01 402 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 XRCC5P13010 732 aaKnown RBP24.56■■□□□ 1.52
PNKP-201ENST00000322344 NAB2Q15742 525 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 SLC15A2Q16348 729 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 C10orf76Q5T2E6 689 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 CCNI2Q6ZMN8 369 aaPredicted RBP24.56■■□□□ 1.52
PNKP-201ENST00000322344 CYP2W1Q8TAV3 490 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 COG1Q8WTW3 980 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 TBC1D5Q92609 795 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 HSD17B14Q9BPX1 270 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 RUSC1Q9BVN2 902 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 SALL4Q9UJQ4 1053 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 ADAM21Q9UKJ8 722 aa24.56■■□□□ 1.52
PNKP-201ENST00000322344 EML1O00423 815 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 EIF3DO15371 548 aaKnown RBP eCLIP24.55■■□□□ 1.52
PNKP-201ENST00000322344 PLA2G6O60733 806 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 EPB41P11171 864 aaKnown RBP24.55■■□□□ 1.52
PNKP-201ENST00000322344 ECE1P42892 770 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 PPP2R5CQ13362 524 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 KLHDC7AQ5VTJ3 777 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 NFRKBQ6P4R8 1299 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 OTOP1Q7RTM1 612 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 SPATA4Q8NEY3 305 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 SLC5A5Q92911 643 aa24.55■■□□□ 1.52
PNKP-201ENST00000322344 RANBP17Q9H2T7 1088 aaKnown RBP24.55■■□□□ 1.52
PNKP-201ENST00000322344 NR3C1P04150 777 aa24.54■■□□□ 1.52
PNKP-201ENST00000322344 TAL1P17542 331 aaPredicted RBP24.54■■□□□ 1.52
PNKP-201ENST00000322344 AARSP49588 968 aaKnown RBP eCLIP24.54■■□□□ 1.52
PNKP-201ENST00000322344 NAP1L1P55209 391 aaKnown RBP24.54■■□□□ 1.52
PNKP-201ENST00000322344 RINT1Q6NUQ1 792 aa24.54■■□□□ 1.52
PNKP-201ENST00000322344 RSBN1LQ6PCB5 846 aaPredicted RBP24.54■■□□□ 1.52
PNKP-201ENST00000322344 GPIHBP1Q8IV16 184 aa24.54■■□□□ 1.52
PNKP-201ENST00000322344 ANKRD13CQ8N6S4 541 aa24.54■■□□□ 1.52
PNKP-201ENST00000322344 TLR10Q9BXR5 811 aa24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms