RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 SV2AQ7L0J3 742 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 GPR142Q7Z601 462 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 NEK8Q86SG6 692 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 KCNG4Q8TDN1 519 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 RSPH1Q8WYR4 309 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 TANC1Q9C0D5 1861 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 LRRC27Q9C0I9 530 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 BCL11AQ9H165 835 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ABHD16BQ9H3Z7 469 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 PXMP2Q9NR77 195 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 SRRDQ9UH36 339 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ZMYM2Q9UBW7 1377 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ZBBXA8MT70 800 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 GAS2O43903 313 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ZEB2O60315 1214 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CAND2O75155 1236 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ALDH5A1P51649 535 aaPredicted RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 JAK3P52333 1124 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 RESTQ13127 1097 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CRHR2Q13324 411 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 NEDD9Q14511 834 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 STXBP2Q15833 593 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 MAP3K21Q5TCX8 1036 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 SYTL5Q8TDW5 730 aaPredicted RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 INPP4AQ96PE3 977 aaPredicted RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ANO3Q9BYT9 981 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 JADE2Q9NQC1 790 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 KCND2Q9NZV8 630 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 BTBD7Q9P203 1132 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 FRMPD2Q68DX3 1309 aaPredicted RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 MYH9P35579 1960 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 MEIS2O14770 477 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 LYPLA2O95372 231 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 F13A1P00488 732 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 HMGCRP04035 888 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 LONP1P36776 959 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 UBXN2AP68543 259 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 NPY5RQ15761 445 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 TMEM266Q2M3C6 531 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 HYIQ5T013 277 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CYP4F22Q6NT55 531 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ZNF746Q6NUN9 644 aaPredicted RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 HEATR3Q7Z4Q2 680 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CTU1Q7Z7A3 348 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 CCAR1Q8IX12 1150 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 SLC17A8Q8NDX2 589 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 SCFD2Q8WU76 684 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 ARMC5Q96C12 935 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 FAM167AQ96KS9 214 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 GBP4Q96PP9 640 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 A1CFQ9NQ94 594 aaKnown RBP3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 INCENPQ9NQS7 918 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 RTEL1Q9NZ71 1219 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 PCDHA6Q9UN73 950 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 PCDHA8Q9Y5H6 950 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 COL4A6Q14031 1691 aa3.73□□□□□ -1.81
SCAMP1-201ENST00000320280 EMSYQ7Z589 1322 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 A0A1W2PQ27 194 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 A0A1W2PQ64 194 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 A0A1W2PQD8 194 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 LARGE1O95461 756 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ERCC3P19447 782 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 CDC42EP1Q00587 391 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PPP2R5CQ13362 524 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SLC35G1Q2M3R5 365 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 BRDTQ58F21 947 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PRAMEF18Q5VWM3 479 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 CNNM4Q6P4Q7 775 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 FBXO46Q6PJ61 603 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 VSIG10LQ86VR7 867 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 DIS3L2Q8IYB7 885 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 AFAP1L1Q8TED9 768 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SLC5A5Q92911 643 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 JPH2Q9BR39 696 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 MXRA8Q9BRK3 442 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PDCD2LQ9BRP1 358 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 KATNAL1Q9BW62 490 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 RUBCNLQ9H714 662 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 TUFT1Q9NNX1 390 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 GJD2Q9UKL4 321 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 MTMR6Q9Y217 621 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 MAP4K5Q9Y4K4 846 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 GOLGA6L22H0YM25 854 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 MEIS1O00470 390 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 TNPO2O14787 897 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 OPLAHO14841 1288 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PPP1R11O60927 126 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 HSPA8P11142 646 aaKnown RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 SYT1P21579 422 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 KRT85P78386 507 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 ATP2C1P98194 919 aaPredicted RBP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 TTLL4Q14679 1199 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PGM5Q15124 567 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 PCBP1Q15365 356 aaKnown RBP eCLIP3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 C1orf53Q5VUE5 145 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 HAUS3Q68CZ6 603 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 TTBK2Q6IQ55 1244 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 FOXR2Q6PJQ5 311 aa3.72□□□□□ -1.81
SCAMP1-201ENST00000320280 MOB2Q70IA6 237 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms