RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 HSDL1Q3SXM5 330 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 LONRF3Q496Y0 759 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 POTEBQ6S5H4 581 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 ELOA2Q8IYF1 753 aaPredicted RBP15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PDILTQ8N807 584 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PPTC7Q8NI37 304 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 DHX58Q96C10 678 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 SPATA33Q96N06 139 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PANK2Q9BZ23 570 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 ZSWIM4Q9H7M6 989 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 MAGEF1Q9HAY2 307 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 RGL1Q9NZL6 768 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 PTCH2Q9Y6C5 1203 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 KAT6AQ92794 2004 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 MYH11P35749 1972 aa15.24■□□□□ 0.03
PRPF18-201ENST00000320054 EMSYQ7Z589 1322 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 IGSF9BQ9UPX0 1349 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 NOP56O00567 594 aaKnown RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 SEPT4O43236 478 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 ACTN4O43707 911 aaKnown RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 SORBS3O60504 671 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 DUSP11O75319 330 aaKnown RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 LGR5O75473 907 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 HSPA1AP0DMV8 641 aaKnown RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 HSPA1BP0DMV9 641 aaKnown RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 HOXD8P13378 290 aaPredicted RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 SP4Q02446 784 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 CYP4A11Q02928 519 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 NAALADL2Q58DX5 795 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 GJC2Q5T442 439 aaPredicted RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 KANK3Q6NY19 840 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 PDXDC2PQ6P474 469 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 C4orf19Q8IY42 314 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 OR6J1Q8NGC5 347 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 AFAP1L1Q8TED9 768 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 ATP6V0A1Q93050 837 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 SYAP1Q96A49 352 aaPredicted RBP15.23■□□□□ 0.03
PRPF18-201ENST00000320054 NACC1Q96RE7 527 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 LXNQ9BS40 222 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 SERTAD1Q9UHV2 236 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 KIAA1024Q9UPX6 916 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 TELO2Q9Y4R8 837 aa15.23■□□□□ 0.03
PRPF18-201ENST00000320054 POTEFA5A3E0 1075 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 A6NJR5 290 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 PPFIA4O75335 1185 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 INHAP05111 366 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 XRCC6P12956 609 aaKnown RBP eCLIP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 TCF7P36402 384 aaPredicted RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 NKX3-2P78367 333 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CTTNQ14247 550 aaKnown RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 FAM160B1Q5W0V3 765 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 SWSAP1Q6NVH7 229 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 POTEGQ6S5H5 508 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CTU1Q7Z7A3 348 aaKnown RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 TLK2Q86UE8 772 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CCDC60Q8IWA6 550 aaPredicted RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 TPH2Q8IWU9 490 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CEP57L1Q8IYX8 460 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 BANK1Q8NDB2 785 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CNNM3Q8NE01 707 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 RAD54LQ92698 747 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CCDC34Q96HJ3 373 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 PLIN2Q99541 437 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 AP5M1Q9H0R1 490 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 UPF3AQ9H1J1 476 aaKnown RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 CLSTN2Q9H4D0 955 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 ZNF302Q9NR11 478 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 BLOC1S4Q9NUP1 217 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 GABBR1Q9UBS5 961 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 DNM3Q9UQ16 869 aa15.22■□□□□ 0.03
PRPF18-201ENST00000320054 MAFBQ9Y5Q3 323 aaPredicted RBP15.22■□□□□ 0.03
PRPF18-201ENST00000320054 BACH1O14867 736 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 DYNC1LI2O43237 492 aaPredicted RBP15.21■□□□□ 0.03
PRPF18-201ENST00000320054 EYA4O95677 639 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 CCND3P30281 292 aaPredicted RBP15.21■□□□□ 0.03
PRPF18-201ENST00000320054 SLC26A2P50443 739 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 UGCGQ16739 394 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 CCDC183Q5T5S1 534 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 PLPPR4Q7Z2D5 763 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 KCNK18Q7Z418 384 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 SH3RF1Q7Z6J0 888 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 LRRC15Q8TF66 581 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 AFG1LQ8WV93 481 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 PCYT2Q99447 389 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 KBTBD4Q9NVX7 518 aa15.21■□□□□ 0.03
PRPF18-201ENST00000320054 WRAP73Q9P2S5 460 aaPredicted RBP15.21■□□□□ 0.03
PRPF18-201ENST00000320054 HOOK1Q9UJC3 728 aaKnown RBP15.21■□□□□ 0.03
PRPF18-201ENST00000320054 DBR1Q9UK59 544 aaKnown RBP15.21■□□□□ 0.03
PRPF18-201ENST00000320054 CTAGE5O15320 804 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 MSCO60682 206 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 MMP3P08254 477 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 PTGS1P23219 599 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 CNGA1P29973 690 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 CPT1AP50416 773 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 STAT5BP51692 787 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 LBX1P52954 281 aa15.2■□□□□ 0.02
PRPF18-201ENST00000320054 GJA9P57773 515 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms