RNA–Protein interactions for RNA: ENST00000317571.7

TTC39C-202, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TTC39C, Length 2,442 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-202ENST00000317571 IKZF4Q9H2S9 585 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 DEF6Q9H4E7 631 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 ZNF277Q9NRM2 450 aaPredicted RBP22.73■■□□□ 1.23
TTC39C-202ENST00000317571 SYNPO2Q9UMS6 1093 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 L1RE1Q9UN81 338 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 OAS2P29728 719 aaKnown RBP22.73■■□□□ 1.23
TTC39C-202ENST00000317571 CTTNQ14247 550 aaKnown RBP22.73■■□□□ 1.23
TTC39C-202ENST00000317571 TSGA10Q9BZW7 698 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 GANQ9H2C0 597 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 ARHGEF10LQ9HCE6 1279 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 TRAF3IP3Q9Y228 551 aa22.73■■□□□ 1.23
TTC39C-202ENST00000317571 POLR3GO15318 223 aaPredicted RBP22.72■■□□□ 1.23
TTC39C-202ENST00000317571 GNA14O95837 355 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 VIL1P09327 827 aaKnown RBP22.72■■□□□ 1.23
TTC39C-202ENST00000317571 ZNF76P36508 570 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 USP14P54578 494 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 SPDYE2Q495Y8 402 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 MIGA2Q7L4E1 593 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 PIGOQ8TEQ8 1089 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 DRC1Q96MC2 740 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 POLR3CQ9BUI4 534 aaPredicted RBP22.72■■□□□ 1.23
TTC39C-202ENST00000317571 RANBP17Q9H2T7 1088 aaKnown RBP22.72■■□□□ 1.23
TTC39C-202ENST00000317571 FBXO28Q9NVF7 368 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 KCNH2Q12809 1159 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 KNOP1Q1ED39 458 aaKnown RBP22.72■■□□□ 1.23
TTC39C-202ENST00000317571 OTOP1Q7RTM1 612 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 HSD17B14Q9BPX1 270 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 TMOD2Q9NZR1 351 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 ASTN1O14525 1302 aa22.72■■□□□ 1.23
TTC39C-202ENST00000317571 PJA2O43164 708 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 MAGEA1P43355 309 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 TUBB4BP68371 445 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 DLGAP5Q15398 846 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 COG1Q8WTW3 980 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 CAMKK2Q96RR4 588 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 SSU72P8A0A1W2PR75 194 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 SFI1A8K8P3 1242 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 RBAK-RBAKDNI3L0D1 243 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 PSMD10O75832 226 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 ACTN1P12814 892 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 FAM193AP78312 1265 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 PPP4R3CPQ6ZMV5 832 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 VEZTQ9HBM0 779 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 WRAP73Q9P2S5 460 aaPredicted RBP22.71■■□□□ 1.23
TTC39C-202ENST00000317571 SNX12Q9UMY4 172 aa22.71■■□□□ 1.23
TTC39C-202ENST00000317571 ERICH4A6NGS2 130 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 CETN3O15182 167 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 CHMP2AO43633 222 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 USO1O60763 962 aaKnown RBP22.7■■□□□ 1.22
TTC39C-202ENST00000317571 SLITRK3O94933 977 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 EYA4O95677 639 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 RASSF7Q02833 373 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 TDRD12Q587J7 1177 aaKnown RBP22.7■■□□□ 1.22
TTC39C-202ENST00000317571 RINT1Q6NUQ1 792 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 WDR93Q6P2C0 686 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 CREG2Q8IUH2 290 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 TRIM58Q8NG06 486 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 JADE2Q9NQC1 790 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 SCAF8Q9UPN6 1271 aaKnown RBP22.7■■□□□ 1.22
TTC39C-202ENST00000317571 RABGAP1Q9Y3P9 1069 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 AKAP3O75969 853 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 CASP4P49662 377 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 SFMBT2Q5VUG0 894 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 DYDC2Q96IM9 177 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 PGAP2Q9UHJ9 254 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 HDAC9Q9UKV0 1011 aa22.7■■□□□ 1.22
TTC39C-202ENST00000317571 KCNA3P22001 575 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 RXRBP28702 533 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 BMT2Q1RMZ1 405 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 SAMD1Q6SPF0 538 aaPredicted RBP22.69■■□□□ 1.22
TTC39C-202ENST00000317571 VCPKMTQ9H867 229 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 GOPCQ9HD26 462 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 FAM184BQ9ULE4 1060 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 JRKLQ9Y4A0 524 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 ZMYM2Q9UBW7 1377 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 NCK2O43639 380 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 SLC9A1P19634 815 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 C2orf54Q08AI8 447 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 ARHGAP27Q6ZUM4 889 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 LARGE2Q8N3Y3 721 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 SYN2Q92777 582 aaPredicted RBP22.69■■□□□ 1.22
TTC39C-202ENST00000317571 SLC5A5Q92911 643 aa22.69■■□□□ 1.22
TTC39C-202ENST00000317571 TACC1O75410 805 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 CYP2C19P33261 490 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 NFRKBQ6P4R8 1299 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 SMARCAL1Q9NZC9 954 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 GCOM1H8Y6P7 765 aaPredicted RBP22.68■■□□□ 1.22
TTC39C-202ENST00000317571 BUB1O43683 1085 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 SERPING1P05155 500 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 POLR2MP0CAP2 368 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 ARP10275 920 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 LRCH2Q5VUJ6 765 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 TTLL6Q8N841 843 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 FAM133AQ8N9E0 248 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 EHD2Q9NZN4 543 aa22.68■■□□□ 1.22
TTC39C-202ENST00000317571 PDXKO00764 312 aa22.67■■□□□ 1.22
TTC39C-202ENST00000317571 TGFB1I1O43294 461 aa22.67■■□□□ 1.22
TTC39C-202ENST00000317571 ZMYND10O75800 440 aa22.67■■□□□ 1.22
TTC39C-202ENST00000317571 ARID5AQ03989 594 aa22.67■■□□□ 1.22
TTC39C-202ENST00000317571 PPP2R5CQ13362 524 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms