RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 CDK17Q00537 523 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 SMC1AQ14683 1233 aaKnown RBP16.3■□□□□ 0.2
CLK4-201ENST00000316308 COG2Q14746 738 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 SPA17Q15506 151 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 LARGE2Q8N3Y3 721 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 DYDC2Q96IM9 177 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 SH2D3AQ9BRG2 576 aa16.3■□□□□ 0.2
CLK4-201ENST00000316308 KCNA3P22001 575 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 KCNH2Q12809 1159 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 GJB7Q6PEY0 223 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 TRMT1LQ7Z2T5 733 aaKnown RBP16.29■□□□□ 0.2
CLK4-201ENST00000316308 FAM133AQ8N9E0 248 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 HDAC7Q8WUI4 952 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 GTPBP4Q9BZE4 634 aaKnown RBP16.29■□□□□ 0.2
CLK4-201ENST00000316308 LRRC27Q9C0I9 530 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 BCS1LQ9Y276 419 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 TMX2Q9Y320 296 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 ERICH4A6NGS2 130 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
CLK4-201ENST00000316308 SLITRK3O94933 977 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 IPO7O95373 1038 aaKnown RBP16.29■□□□□ 0.2
CLK4-201ENST00000316308 GABPB1Q06547 395 aaPredicted RBP16.29■□□□□ 0.2
CLK4-201ENST00000316308 DLGAP5Q15398 846 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 PTPROQ16827 1216 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 HAUS3Q68CZ6 603 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 PLEKHA4Q9H4M7 779 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
CLK4-201ENST00000316308 MAP2K7O14733 419 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 DPEP1P16444 411 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 RXRBP28702 533 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 CIITAP33076 1130 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 MAGEA1P43355 309 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 MOXD1Q6UVY6 613 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.28■□□□□ 0.2
CLK4-201ENST00000316308 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 CAMKK2Q96RR4 588 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 L1RE1Q9UN81 338 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 ASTN1O14525 1302 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 LRRIQ3A6PVS8 624 aaPredicted RBP16.28■□□□□ 0.2
CLK4-201ENST00000316308 RAPGEF1Q13905 1077 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 UTP14CQ5TAP6 766 aaKnown RBP16.28■□□□□ 0.2
CLK4-201ENST00000316308 RINT1Q6NUQ1 792 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 EPM2AIP1Q7L775 607 aaPredicted RBP16.28■□□□□ 0.2
CLK4-201ENST00000316308 CREG2Q8IUH2 290 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 HSD17B14Q9BPX1 270 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 GLT8D2Q9H1C3 349 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 GOLPH3Q9H4A6 298 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 COL20A1Q9P218 1284 aa16.28■□□□□ 0.2
CLK4-201ENST00000316308 PACSIN2Q9UNF0 486 aaPredicted RBP16.28■□□□□ 0.2
CLK4-201ENST00000316308 TNS1Q9HBL0 1735 aaKnown RBP16.27■□□□□ 0.2
CLK4-201ENST00000316308 ABCB11O95342 1321 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 A0A087X0T9 212 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 FGFR1OPO95684 399 aaKnown RBP16.27■□□□□ 0.2
CLK4-201ENST00000316308 FAM228BP0C875 321 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 INPP5BP32019 993 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 MATR3P43243 847 aaKnown RBP eCLIP16.27■□□□□ 0.2
CLK4-201ENST00000316308 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
CLK4-201ENST00000316308 ZNF772Q68DY9 489 aaPredicted RBP16.27■□□□□ 0.2
CLK4-201ENST00000316308 ZNF662Q6ZS27 426 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 DEFB132Q7Z7B7 95 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 ADAMTS1Q9UHI8 967 aa16.27■□□□□ 0.2
CLK4-201ENST00000316308 GCNT3O95395 438 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 LCA5LO95447 670 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 BRD3Q15059 726 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 KNOP1Q1ED39 458 aaKnown RBP16.27■□□□□ 0.19
CLK4-201ENST00000316308 BANK1Q8NDB2 785 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 IL31RAQ8NI17 732 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 FAM151AQ8WW52 585 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 MS4A14Q96JA4 679 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 GANQ9H2C0 597 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 RABGAP1Q9Y3P9 1069 aa16.27■□□□□ 0.19
CLK4-201ENST00000316308 PSMD10O75832 226 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 VIL1P09327 827 aaKnown RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 LRCH2Q5VUJ6 765 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 MAEAQ7L5Y9 396 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 RGS17Q9UGC6 210 aaPredicted RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 FZD1Q9UP38 647 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 PCDHB13Q9Y5F0 798 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 ASTN2O75129 1339 aaPredicted RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 PITPNM2Q9BZ72 1349 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 TBX3O15119 743 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 TGFB1I1O43294 461 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 FOSP01100 380 aaPredicted RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 USP14P54578 494 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 SPDYE2Q495Y8 402 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 TTLL6Q8N841 843 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 RBM46Q8TBY0 533 aaKnown RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 FAM20AQ96MK3 541 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 CEP63Q96MT8 703 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 NAP1L4Q99733 375 aaKnown RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 ARHGEF10LQ9HCE6 1279 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 CEP72Q9P209 647 aa16.26■□□□□ 0.19
CLK4-201ENST00000316308 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
CLK4-201ENST00000316308 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 NFIBO00712 420 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 PHACTR2O75167 634 aa16.25■□□□□ 0.19
CLK4-201ENST00000316308 KLRC1P26715 233 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms