RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 EPB41L5Q9HCM4 733 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 C5P01031 1676 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 NDUFAB1O14561 156 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 ERVK-24P63145 666 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 FAM204AQ9H8W3 233 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 NOP56O00567 594 aaKnown RBP14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 GIMAP7Q8NHV1 300 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 DEPTORQ8TB45 409 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 ACCSQ96QU6 501 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 DPH5Q9H2P9 285 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 TFR2Q9UP52 801 aa14.63□□□□□ -0.07
PCDHB9-201ENST00000316105 HNRNPDLO14979 420 aaKnown RBP14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 LIG4P49917 911 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 GYS2P54840 703 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 FUT2Q10981 343 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 TERF2Q15554 542 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 ANKS1AQ92625 1134 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 PALMO75781 387 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 TTI2Q6NXR4 508 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 NFRKBQ6P4R8 1299 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 RIOX1Q9H6W3 641 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 ZCCHC17Q9NP64 241 aaKnown RBP14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 TYW1Q9NV66 732 aaKnown RBP14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 PDXDC1Q6P996 788 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 SH3RF1Q7Z6J0 888 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 ANKRD35Q8N283 1001 aa14.62□□□□□ -0.07
PCDHB9-201ENST00000316105 NCK2O43639 380 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 ECM2O94769 699 aaPredicted RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 CEP85LQ5SZL2 805 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 COL23A1Q86Y22 540 aaPredicted RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 TMEM206Q9H813 350 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 PNMA2Q9UL42 364 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 PRR12Q9ULL5 1215 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 PMS1P54277 932 aaKnown RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 E2F4Q16254 413 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 LIN9Q5TKA1 542 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 CEP170P1Q96L14 293 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 RASSF4Q9H2L5 321 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 AZI2Q9H6S1 392 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 SEPT9Q9UHD8 586 aaPredicted RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 USTQ9Y2C2 406 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 ZBTB12Q9Y330 459 aaPredicted RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 RNF40O75150 1001 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 DDR1Q08345 913 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 RUFY4Q6ZNE9 571 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 UBE2TQ9NPD8 197 aaPredicted RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 C1orf112Q9NSG2 853 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 ASIC3Q9UHC3 531 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 IPO5O00410 1097 aaKnown RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 EPHB4P54760 987 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 TRPC3Q13507 836 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 KRT71Q3SY84 523 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 CPLX4Q7Z7G2 160 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 GLG1Q92896 1179 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 CCDC77Q9BR77 488 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 PAGR1Q9BTK6 254 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 RAB17Q9H0T7 212 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 RAVER2Q9HCJ3 691 aaKnown RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 DDX4Q9NQI0 724 aaKnown RBP14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 INTS13Q9NVM9 706 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 RNF14Q9UBS8 474 aa14.61□□□□□ -0.07
PCDHB9-201ENST00000316105 LRRIQ4A6NIV6 560 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 CTNNA1P35221 906 aaKnown RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 ACTN2P35609 894 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 GSPT2Q8IYD1 628 aaKnown RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 CERKQ8TCT0 537 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 ATP6V0A1Q93050 837 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 ST7Q9NRC1 585 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 PHRF1Q9P1Y6 1649 aaKnown RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 POLRMTO00411 1230 aaKnown RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 ENTPD3O75355 529 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 ATP1A2P50993 1020 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 PDE6CP51160 858 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 VSNL1P62760 191 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 MESDQ14696 234 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 PADI6Q6TGC4 694 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 REEP2Q9BRK0 252 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 STMN4Q9H169 189 aaPredicted RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 KMT5AQ9NQR1 393 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 FEM1BQ9UK73 627 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 GOLGA8IPA6NC78 632 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 GOLGA8JA6NMD2 632 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 PGRMC1O00264 195 aaKnown RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 MXI1P50539 228 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 POLGP54098 1239 aaPredicted RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 USP14P54578 494 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 PEX3P56589 373 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 TBX2Q13207 712 aaPredicted RBP14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 C10orf76Q5T2E6 689 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 PRDM4Q9UKN5 801 aa14.6□□□□□ -0.07
PCDHB9-201ENST00000316105 A0A1W2PRG0 241 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 MTMR1Q13613 665 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 CEP55Q53EZ4 464 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 KCTD16Q68DU8 428 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 LDHDQ86WU2 507 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 NT5C1BQ96P26 610 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 OSBPL9Q96SU4 736 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 EYA4O95677 639 aa14.59□□□□□ -0.07
PCDHB9-201ENST00000316105 NMT1P30419 496 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms