RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CFAP157Q5JU67 520 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 INTS8Q75QN2 995 aaKnown RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SLC16A10Q8TF71 515 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SPON1Q9HCB6 807 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZNF70Q9UC06 446 aaPredicted RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 KIF1AQ12756 1690 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TNS2Q63HR2 1409 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PDS5AQ29RF7 1337 aaKnown RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 LRRN2O75325 713 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SLC15A2Q16348 729 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PDZD4Q76G19 769 aaPredicted RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZBTB33Q86T24 672 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SFR1Q86XK3 245 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 COASYQ13057 564 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NEDD9Q14511 834 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MRRFQ96E11 262 aaKnown RBP13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 CEP63Q96MT8 703 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NUB1Q9Y5A7 615 aa13.94□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 GFPT2O94808 682 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TDP2O95551 362 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SHC4Q6S5L8 630 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TSC1Q92574 1164 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZNF653Q96CK0 615 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MAP3K14Q99558 947 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MSTO1Q9BUK6 570 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 BCL2L12Q9HB09 334 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PPANQ9NQ55 473 aaKnown RBP13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 POTEB3A0JP26 581 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZNF233A6NK53 670 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SFI1A8K8P3 1242 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 POTECB2RU33 542 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MED7O43513 233 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 RASA1P20936 1047 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 POTEBQ6S5H4 581 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 IQCA1LA6NCM1 817 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SOWAHDA6NJG2 315 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MARK3P27448 753 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PTPROQ16827 1216 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 LDHDQ86WU2 507 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 LPAR1Q92633 364 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 CNOT7Q9UIV1 285 aaKnown RBP13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TBC1D8O95759 1140 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 VIMP08670 466 aaKnown RBP13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SARNPP82979 210 aaKnown RBP13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ERCC6LQ2NKX8 1250 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 FAM151AQ8WW52 585 aa13.93□□□□□ -0.18
SH3PXD2A-201ENST00000315994 GYS1P13807 737 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZSCAN20P17040 1043 aaPredicted RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 EIF4A3P38919 411 aaKnown RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ADCY8P40145 1251 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MESDQ14696 234 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MFAP3LO75121 409 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SRGAP2CP0DJJ0 459 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 GBP1P32455 592 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PRCPP42785 496 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 QARSP47897 775 aaKnown RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MNAT1P51948 309 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 P3H4Q92791 437 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 RPF1Q9H9Y2 349 aaKnown RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SEL1LQ9UBV2 794 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 IFNB1P01574 187 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PPP4CP60510 307 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MYO1EQ12965 1108 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TTC31Q49AM3 519 aaPredicted RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 C10orf67Q8IYJ2 551 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 BBOF1Q8ND07 529 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZFP91Q96JP5 570 aaPredicted RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 VPS37BQ9H9H4 285 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 FBXO2Q9UK22 296 aaPredicted RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 IPO5O00410 1097 aaKnown RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NDUFA10O95299 355 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 KIF11P52732 1056 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 FYB2Q5VWT5 728 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 CASC4Q6P4E1 433 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MAP7D3Q8IWC1 876 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 OTUD5Q96G74 571 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SNX25Q9H3E2 840 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 KIAA1586Q9HCI6 787 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ZNF302Q9NR11 478 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TYW1Q9NV66 732 aaKnown RBP13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PSMD14O00487 310 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 CASP1P29466 404 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MAPK4P31152 587 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 STAT3P40763 770 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 PDIA5Q14554 519 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 TTBK2Q6IQ55 1244 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 SRGAP1Q7Z6B7 1085 aa13.92□□□□□ -0.18
SH3PXD2A-201ENST00000315994 BCL9O00512 1426 aa13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 LGALS16A8MUM7 142 aa13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 MAN1A1P33908 653 aa13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 ACRBPQ8NEB7 543 aa13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NLRP4Q96MN2 994 aa13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 IFT122Q9HBG6 1241 aa13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.91□□□□□ -0.18
SH3PXD2A-201ENST00000315994 NR3C1P04150 777 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms