RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 A1CFQ9NQ94 594 aaKnown RBP8.71□□□□□ -1.02
CNOT4-201ENST00000315544 OLFML3Q9NRN5 406 aa8.71□□□□□ -1.02
CNOT4-201ENST00000315544 SREBF1P36956 1147 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 PSMC6P62333 389 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 ENPEPQ07075 957 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 CIAPIN1Q6FI81 312 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 TLDC1Q6P9B6 456 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 SAPCD2Q86UD0 394 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 ST6GALNAC4Q9H4F1 302 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 MYOZ2Q9NPC6 264 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 EXOC1Q9NV70 894 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 TAB2Q9NYJ8 693 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 EHD2Q9NZN4 543 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 NUMBLQ9Y6R0 609 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 A0A1W2PRG0 241 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 DDNO94850 711 aaPredicted RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 SMC2O95347 1197 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 NKX3-2P78367 333 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 GUCY2DQ02846 1103 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 PPP2R5CQ13362 524 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 SH3D19Q5HYK7 790 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 SWT1Q5T5J6 900 aaKnown RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 PRPF38AQ8NAV1 312 aaKnown RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 ATXN2LQ8WWM7 1075 aaKnown RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 CNOT6LQ96LI5 555 aaKnown RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 NAPGQ99747 312 aaPredicted RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 ANAPC1Q9H1A4 1944 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 TRIP11Q15643 1979 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 CEP350Q5VT06 3117 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 OR52Z1P0C646 297 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 VCAM1P19320 739 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 TFAP4Q01664 338 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 INF2Q27J81 1249 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 CGB2Q6NT52 195 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 ANKS1BQ7Z6G8 1248 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 RASAL3Q86YV0 1011 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 ADGRF4Q8IZF3 695 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 MS4A4AQ96JQ5 239 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 TMEM109Q9BVC6 243 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 PACSIN1Q9BY11 444 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 RBM12Q9NTZ6 932 aaKnown RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 WBP1LQ9NX94 342 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 CNOT8Q9UFF9 292 aaKnown RBP8.7□□□□□ -1.02
CNOT4-201ENST00000315544 PCDHA13Q9Y5I0 950 aa8.7□□□□□ -1.02
CNOT4-201ENST00000315544 WNT10BO00744 389 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 MEFVO15553 781 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CHRNB2P17787 502 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 SEPT2Q15019 361 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 GALNTL6Q49A17 601 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 KDM7AQ6ZMT4 941 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 RELL1Q8IUW5 271 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 SYT2Q8N9I0 419 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 NEK11Q8NG66 645 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CXorf38Q8TB03 319 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 PSPC1Q8WXF1 523 aaKnown RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 RIN2Q8WYP3 895 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 SELENOOQ9BVL4 669 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 MED4Q9NPJ6 270 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 NOCTQ9UK39 431 aaKnown RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 ADAMTS5Q9UNA0 930 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CNTN6Q9UQ52 1028 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 ZSCAN5CA6NGD5 496 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 LRRC53A6NM62 1247 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 AKR1B1P15121 316 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CTNNA2P26232 953 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 EPS15P42566 896 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 ERVK-9P63128 1117 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 NT5DC3Q86UY8 548 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CEP112Q8N8E3 955 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 C12orf50Q8NA57 414 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 REPS2Q8NFH8 660 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 ARL8AQ96BM9 186 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CEP63Q96MT8 703 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 JPH2Q9BR39 696 aaPredicted RBP8.69□□□□□ -1.02
CNOT4-201ENST00000315544 IKZF4Q9H2S9 585 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 JRKLQ9Y4A0 524 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 A0A087X0T9 212 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 FAM228BP0C875 321 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 PON1P27169 355 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 COASYQ13057 564 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 KIF22Q14807 665 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 SMYD5Q6GMV2 418 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CNPY4Q8N129 248 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 CASKIN2Q8WXE0 1202 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 HERPUD2Q9BSE4 406 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 NDST4Q9H3R1 872 aa8.69□□□□□ -1.02
CNOT4-201ENST00000315544 DDX3XO00571 662 aaKnown RBP eCLIP8.68□□□□□ -1.02
CNOT4-201ENST00000315544 TBX3O15119 743 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 PPFIA2O75334 1257 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 CASQ1P31415 396 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 GGCXP38435 758 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 PTP4A2Q12974 167 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 SLC18A3Q16572 532 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 LACTB2Q53H82 288 aaPredicted RBP8.68□□□□□ -1.02
CNOT4-201ENST00000315544 HSP90AA4PQ58FG1 418 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 TAF3Q5VWG9 929 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 SH2D5Q6ZV89 423 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 PALB2Q86YC2 1186 aa8.68□□□□□ -1.02
CNOT4-201ENST00000315544 TBCKQ8TEA7 893 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms