RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PLCB4Q15147 1175 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 GRIK4Q16099 956 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 FAM26DQ5JW98 314 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 CNKSR3Q6P9H4 555 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 PLPPR4Q7Z2D5 763 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 FAM177A1Q8N128 213 aaPredicted RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 NECAB1Q8N987 351 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 BICD2Q8TD16 824 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 GTF3C6Q969F1 213 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 MBOAT7Q96N66 472 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 SDF4Q9BRK5 362 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 MTIF3Q9H2K0 278 aaKnown RBP16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 KCNJ14Q9UNX9 436 aa16.61■□□□□ 0.25
PPP1CA-201ENST00000312989 A0A0C4DFX4 3053 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 ZBBXA8MT70 800 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 DEFB103AP81534 67 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 SETQ01105 290 aaPredicted RBP16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 PPFIA1Q13136 1202 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 PRR16Q569H4 304 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 B3GNT9Q6UX72 402 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 BLIDQ8IZY5 108 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 TBCKQ8TEA7 893 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 MYLIPQ8WY64 445 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 SLKQ9H2G2 1235 aaPredicted RBP16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 NKX2-4Q9H2Z4 354 aa16.6■□□□□ 0.25
PPP1CA-201ENST00000312989 RSPH10B2B2RC85 870 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 ZBTB42B2RXF5 422 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 DDX39AO00148 427 aaKnown RBP16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 MSH4O15457 936 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 TDP2O95551 362 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 CHRNA1P02708 482 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 RSPH10BP0C881 870 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 INSRRP14616 1297 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 ZNF76P36508 570 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 USP11P51784 963 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 ANKRD1Q15327 319 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 RAB30Q15771 203 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 PLEKHG4Q58EX7 1191 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 TMCO2Q7Z6W1 182 aaPredicted RBP16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 NSUN7Q8NE18 718 aaKnown RBP16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 PHOSPHO2Q8TCD6 241 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 OXER1Q8TDS5 423 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 GLG1Q92896 1179 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 SLC9A7Q96T83 725 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 FTOQ9C0B1 505 aaKnown RBP eCLIP16.59■□□□□ 0.255e-10■□□□□ 9
PPP1CA-201ENST00000312989 PCDHA11Q9Y5I1 949 aa16.59■□□□□ 0.25
PPP1CA-201ENST00000312989 PTPRSQ13332 1948 aa16.58■□□□□ 0.25
PPP1CA-201ENST00000312989 CYP3A7-CYP3A51PA0A087WV96 503 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 CTSHP09668 335 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 ACTN1P12814 892 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 CYP3A7P24462 503 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 STAT5BP51692 787 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 EARS2Q5JPH6 523 aaKnown RBP16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 SPRED2Q7Z698 418 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 HERC6Q8IVU3 1022 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 DBF4BQ8NFT6 615 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 TRAPPC12Q8WVT3 735 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 TNFRSF25Q93038 417 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 GJA10Q969M2 543 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 ZNF577Q9BSK1 485 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 TUBE1Q9UJT0 475 aa16.58■□□□□ 0.24
PPP1CA-201ENST00000312989 JAK2O60674 1132 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 CDKL5O76039 1030 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 GNAT1P11488 350 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 NEK4P51957 841 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 ADGRE1Q14246 886 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 Q4G0T1 1027 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 GALNT17Q6IS24 598 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 TAF2Q6P1X5 1199 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 CPLX2Q6PUV4 134 aaKnown RBP16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.57■□□□□ 0.241e-6■■■■□ 19.9
PPP1CA-201ENST00000312989 SLC5A5Q92911 643 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 TBC1D22BQ9NU19 505 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 MAFBQ9Y5Q3 323 aaPredicted RBP16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 TRIP12Q14669 1992 aaPredicted RBP16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 IGSF9BQ9UPX0 1349 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 TRANK1O15050 2925 aa16.57■□□□□ 0.24
PPP1CA-201ENST00000312989 SIP14410 1827 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 ABHD14A-ACY1A0A1B0GW23 586 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 LCHNA4D1U4 455 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 CA3P07451 260 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 MOXD1Q6UVY6 613 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 ETNPPLQ8TBG4 499 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 ATP8B4Q8TF62 1192 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 AZI2Q9H6S1 392 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 REV3LO60673 3130 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 VCANP13611 3396 aa16.56■□□□□ 0.24
PPP1CA-201ENST00000312989 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 FAM205CA6NFA0 338 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 SLC37A4O43826 429 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 ZNF862O60290 1169 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 PSMD10O75832 226 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 SLC26A2P50443 739 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 DNAJB3Q8WWF6 145 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 GBF1Q92538 1859 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 ORC3Q9UBD5 711 aaPredicted RBP16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 MSRAQ9UJ68 235 aa16.55■□□□□ 0.24
PPP1CA-201ENST00000312989 POTEB3A0JP26 581 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms