RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MYCLP12524 364 aaPredicted RBP13.84□□□□□ -0.19
RETREG3-201ENST00000309428 ZBED6P86452 979 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 SNCBQ16143 134 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 SBK1Q52WX2 424 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 PPP1R12CQ9BZL4 782 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 CAPN6Q9Y6Q1 641 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 PLA2G4BP0C869 781 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 GRB10Q13322 594 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 SLC10A5Q5PT55 438 aa13.84□□□□□ -0.19
RETREG3-201ENST00000309428 DUSP9Q99956 384 aaKnown RBP13.84□□□□□ -0.19
RETREG3-201ENST00000309428 RBM12Q9NTZ6 932 aaKnown RBP13.84□□□□□ -0.19
RETREG3-201ENST00000309428 ZNF142P52746 1687 aaPredicted RBP13.84□□□□□ -0.19
RETREG3-201ENST00000309428 ATRNO75882 1429 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 RHBDL3P58872 404 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 VPS72Q15906 364 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 GKAP1Q5VSY0 366 aaPredicted RBP13.83□□□□□ -0.19
RETREG3-201ENST00000309428 KRT27Q7Z3Y8 459 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 SH3RF1Q7Z6J0 888 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 MSANTD4Q8NCY6 345 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 HNRNPLLQ8WVV9 542 aaKnown RBP13.83□□□□□ -0.19
RETREG3-201ENST00000309428 SERPINA10Q9UK55 444 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 CEP83Q9Y592 693 aa13.83□□□□□ -0.19
RETREG3-201ENST00000309428 EIF3HO15372 352 aaKnown RBP eCLIP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 PALMO75781 387 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 MYCNP04198 464 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 KCNA1Q09470 495 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 ABCB5Q2M3G0 1257 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 C16orf86Q6ZW13 317 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 ZIM3Q96PE6 472 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 DDX47Q9H0S4 455 aaKnown RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 DNAJC17Q9NVM6 304 aaKnown RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 SIPA1L3O60292 1781 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 F5H6K3 240 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 KLRC3Q07444 240 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 COASYQ13057 564 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 TTI2Q6NXR4 508 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 BARGINQ6ZT62 677 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 APTXQ7Z2E3 356 aaKnown RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 CDAN1Q8IWY9 1227 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 FAM84AQ96KN4 292 aa13.83□□□□□ -0.2
RETREG3-201ENST00000309428 RNPC3Q96LT9 517 aaKnown RBP13.83□□□□□ -0.2
RETREG3-201ENST00000309428 GPR75-ASB3A0A0A6YYF3 556 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 SKAP2O75563 359 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 BBOX1O75936 387 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 FAM13AO94988 1023 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 PCP11498 1178 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 NEDD9Q14511 834 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 ASIC2Q16515 512 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 NT5DC1Q5TFE4 455 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 SFR1Q86XK3 245 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 CCDC65Q8IXS2 484 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 TBC1D22AQ8WUA7 517 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 ANO3Q9BYT9 981 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 ZMYND12Q9H0C1 365 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 LIMA1Q9UHB6 759 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 NUP98P52948 1817 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 HERVK_113P62684 666 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 HDLBPQ00341 1268 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 DHX9Q08211 1270 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 ZC2HC1CQ53FD0 456 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 NSMFQ6X4W1 530 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 LARGE2Q8N3Y3 721 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 LRRC45Q96CN5 670 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 HARSP12081 509 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 OTUD6AQ7L8S5 288 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 C4orf32Q8N8J7 132 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 GIMAP8Q8ND71 665 aaPredicted RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 ACER1Q8TDN7 264 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 PACSIN1Q9BY11 444 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 HAUS2Q9NVX0 235 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 REXO2Q9Y3B8 237 aaKnown RBP13.82□□□□□ -0.2
RETREG3-201ENST00000309428 CNTNAP4Q9C0A0 1308 aa13.82□□□□□ -0.2
RETREG3-201ENST00000309428 PPP1R11O60927 126 aaPredicted RBP13.81□□□□□ -0.2
RETREG3-201ENST00000309428 GRIPAP1Q4V328 841 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 VWA3BQ502W6 1294 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 FBXO11Q86XK2 927 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 ZNF277Q9NRM2 450 aaPredicted RBP13.81□□□□□ -0.2
RETREG3-201ENST00000309428 CRYBG1Q9Y4K1 1723 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 A0A1W2PRG0 241 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 PHF20L1A8MW92 1017 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 H0YIN7 160 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 KLRC4O43908 158 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 TRIM49P0CI25 452 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 TRIM49CP0CI26 452 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 EEF1GP26641 437 aaKnown RBP13.81□□□□□ -0.2
RETREG3-201ENST00000309428 CAPN12Q6ZSI9 719 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 CCT8L2Q96SF2 557 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 MMTAG2Q9BU76 263 aaKnown RBP13.81□□□□□ -0.2
RETREG3-201ENST00000309428 EMILIN3Q9NT22 766 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 SUFUQ9UMX1 484 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 DNM3Q9UQ16 869 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 TJP1Q07157 1748 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 FAM237AA0A1B0GTK4 181 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 SLC9A1P19634 815 aa13.81□□□□□ -0.2
RETREG3-201ENST00000309428 NMT1P30419 496 aaKnown RBP13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms