RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 MUTP22033 750 aa20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 PSEN2P49810 448 aa20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 UTP14CQ5TAP6 766 aaKnown RBP20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 SLC43A3Q8NBI5 491 aa20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 DIS3LQ8TF46 1054 aaKnown RBP20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 KAT2BQ92831 832 aa20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 TOX2Q96NM4 488 aa20.12■□□□□ 0.81
SSSCA1-201ENST00000309328 IGSF9BQ9UPX0 1349 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 TECP42680 631 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 PSMC5P62195 406 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 KRT85P78386 507 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 IRX5P78411 483 aaPredicted RBP20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 SLC39A14Q15043 492 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 KIAA0753Q2KHM9 967 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 NCAPH2Q6IBW4 605 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 SWSAP1Q6NVH7 229 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 PDXDC2PQ6P474 469 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 SLC39A5Q6ZMH5 540 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 KCTD17Q8N5Z5 321 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 C7orf31Q8N865 590 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 IGSF22Q8N9C0 903 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 KCNG4Q8TDN1 519 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 CHMP5Q9NZZ3 219 aa20.11■□□□□ 0.81
SSSCA1-201ENST00000309328 LONP1P36776 959 aaKnown RBP20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 QARSP47897 775 aaKnown RBP20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 STK38Q15208 465 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 ANKRD33Q7Z3H0 272 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 CCDC60Q8IWA6 550 aaPredicted RBP20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 BBXQ8WY36 941 aaPredicted RBP20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 GJA10Q969M2 543 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 UIMC1Q96RL1 719 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 USP28Q96RU2 1077 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 ZSWIM4Q9H7M6 989 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 LRWD1Q9UFC0 647 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 ZDHHC9Q9Y397 364 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 PPME1Q9Y570 386 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 CLIC4Q9Y696 253 aa20.1■□□□□ 0.81
SSSCA1-201ENST00000309328 NRCAMQ92823 1304 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 TLR3O15455 904 aaKnown RBP20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 HBP1O60381 514 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 PPP6R2O75170 966 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 RPLP2P05387 115 aaKnown RBP20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 RGS19P49795 217 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 PTPAQ15257 358 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 NBPF20Q3BBV1 942 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 FOXD4L5Q5VV16 416 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 ATP8B4Q8TF62 1192 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 FOXD4L4Q8WXT5 416 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 PCYT2Q99447 389 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 POLR3CQ9BUI4 534 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 SCAND2PQ9GZW5 306 aaPredicted RBP20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 TUFT1Q9NNX1 390 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 NRBP2Q9NSY0 501 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 GABBR1Q9UBS5 961 aa20.09■□□□□ 0.81
SSSCA1-201ENST00000309328 POTEB3A0JP26 581 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 RRN3P2A6NIE6 340 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 DCDC2CA8MYV0 355 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 CDK7P50613 346 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 XKR3Q5GH77 459 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 KRT79Q5XKE5 535 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 FAM173BQ6P4H8 233 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 POTEBQ6S5H4 581 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 TRIM50Q86XT4 487 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 C4orf19Q8IY42 314 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 CKAP2LQ8IYA6 745 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 LINC00301Q8NCQ3 95 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 HSD17B14Q9BPX1 270 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 EIF2AK1Q9BQI3 630 aaKnown RBP20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 GTF2IRD1Q9UHL9 959 aa20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 SRPRBQ9Y5M8 271 aaKnown RBP20.08■□□□□ 0.81
SSSCA1-201ENST00000309328 COL1A2P08123 1366 aa20.08■□□□□ 0.8
SSSCA1-201ENST00000309328 VWA3AA6NCI4 1184 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 POTEMA6NI47 508 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 EML1O00423 815 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 SPTLC2O15270 562 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 LYPLA2O95372 231 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 RPA1P27694 616 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 OTUD6AQ7L8S5 288 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 EXOC8Q8IYI6 725 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 KRI1Q8N9T8 703 aaKnown RBP20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 LXNQ9BS40 222 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 TRPC6Q9Y210 931 aa20.07■□□□□ 0.8
SSSCA1-201ENST00000309328 SCN10AQ9Y5Y9 1956 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 KDM3AQ9Y4C1 1321 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 C17orf102A2RUQ5 167 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 OATP04181 439 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 SMIM10L2AP0DMW4 78 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 SMIM10L2BP0DMW5 78 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 HOXC8P31273 242 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 TXLNAP40222 546 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 PSMC6P62333 389 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 PRKCEQ02156 737 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 CEBPZQ03701 1054 aaKnown RBP20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 PPFIA1Q13136 1202 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 PLCB4Q15147 1175 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 FAM47CQ5HY64 1035 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 ZNF484Q5JVG2 852 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 NT5C3AQ9H0P0 336 aa20.06■□□□□ 0.8
SSSCA1-201ENST00000309328 TELO2Q9Y4R8 837 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms