RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 MXRA8Q9BRK3 442 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 PBX4Q9BYU1 374 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 C6orf50Q9HD87 102 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 JPH1Q9HDC5 661 aaPredicted RBP11.15□□□□□ -0.62
CCDC58-201ENST00000291458 JADE2Q9NQC1 790 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 SETD4Q9NVD3 440 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 SLC4A7Q9Y6M7 1214 aa11.15□□□□□ -0.62
CCDC58-201ENST00000291458 TULP1O00294 542 aaPredicted RBP11.14□□□□□ -0.63
CCDC58-201ENST00000291458 TREHO43280 583 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 CKBP12277 381 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 SELPP16109 830 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 SREBF1P36956 1147 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 NLRP5P59047 1200 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 IGBP1P78318 339 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 AP3B2Q13367 1082 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 NTRK3Q16288 839 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 ZNF618Q5T7W0 954 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 TMCO2Q7Z6W1 182 aaPredicted RBP11.14□□□□□ -0.63
CCDC58-201ENST00000291458 SESTD1Q86VW0 696 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 PLA2G4DQ86XP0 818 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 CCDC148Q8NFR7 591 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 CAGE1Q8TC20 777 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 AFAP1L1Q8TED9 768 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 CCDC12Q8WUD4 166 aaPredicted RBP11.14□□□□□ -0.63
CCDC58-201ENST00000291458 VWCEQ96DN2 955 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 ZBTB10Q96DT7 871 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 CDX2Q99626 313 aaPredicted RBP11.14□□□□□ -0.63
CCDC58-201ENST00000291458 SDF4Q9BRK5 362 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 RNF26Q9BY78 433 aaPredicted RBP11.14□□□□□ -0.63
CCDC58-201ENST00000291458 ADAM33Q9BZ11 813 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 KCNH7Q9NS40 1196 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 SLC9A2Q9UBY0 812 aa11.14□□□□□ -0.63
CCDC58-201ENST00000291458 YBX2Q9Y2T7 364 aaKnown RBP11.14□□□□□ -0.63
CCDC58-201ENST00000291458 GSTTP1A0A1W2PQM5 241 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 FOSP01100 380 aaPredicted RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 ACTN1P12814 892 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 ATP2A2P16615 1042 aaKnown RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 IFNAR1P17181 557 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 CLK2P49760 499 aaKnown RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 PPFIA1Q13136 1202 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 PTK7Q13308 1070 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 ITGB3BPQ13352 177 aaPredicted RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 TCTN1Q2MV58 587 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 CEP55Q53EZ4 464 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 RASIP1Q5U651 963 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 TRMT1LQ7Z2T5 733 aaKnown RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 GIMAP8Q8ND71 665 aaPredicted RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 LMBR1Q8WVP7 490 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 SENP7Q9BQF6 1050 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 TM6SF1Q9BZW5 370 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 ZMYND12Q9H0C1 365 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 SLKQ9H2G2 1235 aaPredicted RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 SEMA6BQ9H3T3 888 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 RNPEPQ9H4A4 650 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 AGO4Q9HCK5 861 aaKnown RBP11.13□□□□□ -0.63
CCDC58-201ENST00000291458 TCEAL9Q9UHQ7 104 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 MSRAQ9UJ68 235 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 MICAL3Q7RTP6 2002 aa11.13□□□□□ -0.63
CCDC58-201ENST00000291458 LOXHD1Q8IVV2 1947 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 MYO9BQ13459 2157 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 ESYT2A0FGR8 921 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 FAM86B1E9PN63 330 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 ARHGAP33O14559 1287 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 BACH1O14867 736 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 EPB41L2O43491 1005 aaKnown RBP11.12□□□□□ -0.63
CCDC58-201ENST00000291458 NBNO60934 754 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 LARGE1O95461 756 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 FAM86B2P0C5J1 330 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 FOSL2P15408 326 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 GNA11P29992 359 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 RFC2P35250 354 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 KCNJ6P48051 423 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 AK2P54819 239 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 ACTR2P61160 394 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 SCRN1Q12765 414 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 GRIN2CQ14957 1233 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 GRIK4Q16099 956 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 TRIM71Q2Q1W2 868 aaKnown RBP11.12□□□□□ -0.63
CCDC58-201ENST00000291458 PRR16Q569H4 304 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 FAM117BQ6P1L5 589 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 CPLX2Q6PUV4 134 aaKnown RBP11.12□□□□□ -0.63
CCDC58-201ENST00000291458 RUFY4Q6ZNE9 571 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 FBXL16Q8N461 479 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 NECAB1Q8N987 351 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 TRAPPC12Q8WVT3 735 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 SEPT1Q8WYJ6 367 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 FAM49AQ9H0Q0 323 aaPredicted RBP11.12□□□□□ -0.63
CCDC58-201ENST00000291458 GLT8D2Q9H1C3 349 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 ZNF576Q9H609 170 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 TPCN1Q9ULQ1 816 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
CCDC58-201ENST00000291458 MYH9P35579 1960 aaKnown RBP11.12□□□□□ -0.63
CCDC58-201ENST00000291458 WDR81Q562E7 1941 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 COL4A4P53420 1690 aaPredicted RBP11.11□□□□□ -0.63
CCDC58-201ENST00000291458 CHMP2AO43633 222 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 PFKMP08237 780 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 DEFB103AP81534 67 aa11.11□□□□□ -0.63
CCDC58-201ENST00000291458 RAB30Q15771 203 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms