RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ZNF174Q15697 407 aa30.33■■■□□ 2.45
SSU72-201ENST00000291386 GDF6Q6KF10 455 aaPredicted RBP30.33■■■□□ 2.45
SSU72-201ENST00000291386 SWSAP1Q6NVH7 229 aa30.33■■■□□ 2.45
SSU72-201ENST00000291386 SH3RF1Q7Z6J0 888 aa30.33■■■□□ 2.45
SSU72-201ENST00000291386 TRIM43Q96BQ3 446 aaPredicted RBP30.33■■■□□ 2.45
SSU72-201ENST00000291386 TMEM60Q9H2L4 133 aa30.33■■■□□ 2.45
SSU72-201ENST00000291386 SAMM50Q9Y512 469 aa30.33■■■□□ 2.45
SSU72-201ENST00000291386 KAT6AQ92794 2004 aa30.32■■■□□ 2.44
SSU72-201ENST00000291386 VPS37CA5D8V6 355 aaPredicted RBP30.32■■■□□ 2.44
SSU72-201ENST00000291386 BACH1O14867 736 aa30.32■■■□□ 2.44
SSU72-201ENST00000291386 SPIRE1Q08AE8 756 aa30.32■■■□□ 2.44
SSU72-201ENST00000291386 MIER3Q7Z3K6 550 aa30.32■■■□□ 2.44
SSU72-201ENST00000291386 TNPO1Q92973 898 aaKnown RBP30.32■■■□□ 2.44
SSU72-201ENST00000291386 CTAGE1Q96RT6 745 aa30.32■■■□□ 2.44
SSU72-201ENST00000291386 ZMYND8Q9ULU4 1186 aaPredicted RBP30.32■■■□□ 2.44
SSU72-201ENST00000291386 MTMR6Q9Y217 621 aa30.32■■■□□ 2.44
SSU72-201ENST00000291386 LTBP2Q14767 1821 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 NRCAMQ92823 1304 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 IGSF9BQ9UPX0 1349 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 C17orf102A2RUQ5 167 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 CHMP2AO43633 222 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 STX6O43752 255 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 PLCB4Q15147 1175 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 PTGISQ16647 500 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 PRDM5Q9NQX1 630 aaPredicted RBP30.31■■■□□ 2.44
SSU72-201ENST00000291386 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.31■■■□□ 2.44
SSU72-201ENST00000291386 PCDHA12Q9UN75 941 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 PCDHB6Q9Y5E3 794 aa30.31■■■□□ 2.44
SSU72-201ENST00000291386 TRIP12Q14669 1992 aaPredicted RBP30.3■■■□□ 2.44
SSU72-201ENST00000291386 ADAM17P78536 824 aa30.3■■■□□ 2.44
SSU72-201ENST00000291386 BECN1Q14457 450 aa30.3■■■□□ 2.44
SSU72-201ENST00000291386 HIC1Q14526 733 aa30.3■■■□□ 2.44
SSU72-201ENST00000291386 C4orf32Q8N8J7 132 aa30.3■■■□□ 2.44
SSU72-201ENST00000291386 GABBR1Q9UBS5 961 aa30.3■■■□□ 2.44
SSU72-201ENST00000291386 OR52Z1P0C646 297 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 GNAT1P11488 350 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 SYN1P17600 705 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 ATP4AP20648 1035 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 MARK3P27448 753 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 NBR1Q14596 966 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 PDXDC2PQ6P474 469 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 TTC12Q9H892 705 aaPredicted RBP30.29■■■□□ 2.44
SSU72-201ENST00000291386 CEP290O15078 2479 aa30.29■■■□□ 2.44
SSU72-201ENST00000291386 EML1O00423 815 aa30.28■■■□□ 2.44
SSU72-201ENST00000291386 LAD1O00515 517 aa30.28■■■□□ 2.44
SSU72-201ENST00000291386 PRPF38BQ5VTL8 546 aaKnown RBP30.28■■■□□ 2.44
SSU72-201ENST00000291386 ATP8B4Q8TF62 1192 aa30.28■■■□□ 2.44
SSU72-201ENST00000291386 SETD4Q9NVD3 440 aa30.28■■■□□ 2.44
SSU72-201ENST00000291386 NOD1Q9Y239 953 aa30.28■■■□□ 2.44
SSU72-201ENST00000291386 POTEB3A0JP26 581 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 HBP1O60381 514 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 TIMP1P01033 207 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 TXKP42681 527 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 RESTQ13127 1097 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 PPFIA1Q13136 1202 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 PTK7Q13308 1070 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 EPHA7Q15375 998 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 POTEBQ6S5H4 581 aa30.27■■■□□ 2.44
SSU72-201ENST00000291386 NOC4LQ9BVI4 516 aaKnown RBP30.27■■■□□ 2.44
SSU72-201ENST00000291386 RRN3P2A6NIE6 340 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 CYP2C9P11712 490 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 ITGB8P26012 769 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 ZNF200P98182 395 aaPredicted RBP30.26■■■□□ 2.43
SSU72-201ENST00000291386 RBL2Q08999 1139 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 FERMT3Q86UX7 667 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 LMBR1Q8WVP7 490 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 BBXQ8WY36 941 aaPredicted RBP30.26■■■□□ 2.43
SSU72-201ENST00000291386 ATP6V0A1Q93050 837 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 FAM167AQ96KS9 214 aa30.26■■■□□ 2.43
SSU72-201ENST00000291386 ZSCAN16Q9H4T2 348 aaPredicted RBP30.26■■■□□ 2.43
SSU72-201ENST00000291386 INSRRP14616 1297 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 RAG1P15918 1043 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 PTGDRQ13258 359 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 GRIK4Q16099 956 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 SERINC5Q86VE9 423 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 HIPK3Q9H422 1215 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 TRPC6Q9Y210 931 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 COL1A2P08123 1366 aa30.25■■■□□ 2.43
SSU72-201ENST00000291386 MBLAC1A4D2B0 266 aaPredicted RBP30.24■■■□□ 2.43
SSU72-201ENST00000291386 PITPNM1O00562 1244 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 TREHO43280 583 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 ZNF862O60290 1169 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 PRPHP41219 470 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 UGCGQ16739 394 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 NCAPH2Q6IBW4 605 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 SPRYD3Q8NCJ5 442 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 CAGE1Q8TC20 777 aa30.24■■■□□ 2.43
SSU72-201ENST00000291386 DHX38Q92620 1227 aaKnown RBP30.24■■■□□ 2.43
SSU72-201ENST00000291386 P4HBP07237 508 aaKnown RBP30.23■■■□□ 2.43
SSU72-201ENST00000291386 PSMC5P62195 406 aa30.23■■■□□ 2.43
SSU72-201ENST00000291386 BFSP2Q13515 415 aa30.23■■■□□ 2.43
SSU72-201ENST00000291386 ZNF484Q5JVG2 852 aa30.23■■■□□ 2.43
SSU72-201ENST00000291386 MARCH8Q5T0T0 291 aa30.23■■■□□ 2.43
SSU72-201ENST00000291386 CCDC155Q8N6L0 562 aa30.23■■■□□ 2.43
SSU72-201ENST00000291386 DKC1O60832 514 aaKnown RBP eCLIP30.22■■■□□ 2.43
SSU72-201ENST00000291386 OATP04181 439 aa30.22■■■□□ 2.43
SSU72-201ENST00000291386 QARSP47897 775 aaKnown RBP30.22■■■□□ 2.43
SSU72-201ENST00000291386 FXR2P51116 673 aaKnown RBP eCLIP30.22■■■□□ 2.43
SSU72-201ENST00000291386 ATP2C1P98194 919 aaPredicted RBP30.22■■■□□ 2.43
SSU72-201ENST00000291386 TRIM71Q2Q1W2 868 aaKnown RBP30.22■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms