RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 CST5P28325 142 aaPredicted RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 CYP4A11Q02928 519 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 DGKDQ16760 1214 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 SWSAP1Q6NVH7 229 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 KLHDC9Q8NEP7 349 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 AFAP1L1Q8TED9 768 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 DYDC2Q96IM9 177 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 MCOLN1Q9GZU1 580 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 RNF208Q9H0X6 261 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 SPC25Q9HBM1 224 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 TUFT1Q9NNX1 390 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 MAFBQ9Y5Q3 323 aaPredicted RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 BRCA2P51587 3418 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 MYH9P35579 1960 aaKnown RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 IGSF9BQ9UPX0 1349 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 MUTP22033 750 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 TXLNAP40222 546 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 CCT6AP40227 531 aaKnown RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 QARSP47897 775 aaKnown RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 BEX3Q00994 111 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 ECM1Q16610 540 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 UGCGQ16739 394 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 BRDTQ58F21 947 aaPredicted RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 BANK1Q8NDB2 785 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 MRPS27Q92552 414 aaKnown RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 LXNQ9BS40 222 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 WRAP73Q9P2S5 460 aaPredicted RBP19.3■□□□□ 0.68
SKP2-201ENST00000274254 GABBR1Q9UBS5 961 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 HPSEQ9Y251 543 aa19.3■□□□□ 0.68
SKP2-201ENST00000274254 KDM3AQ9Y4C1 1321 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 MYCP01106 439 aaPredicted RBP19.29■□□□□ 0.68
SKP2-201ENST00000274254 LGALS2P05162 132 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 PSMC5P62195 406 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 GRB10Q13322 594 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 CTTNQ14247 550 aaKnown RBP19.29■□□□□ 0.68
SKP2-201ENST00000274254 CCSAPQ6IQ19 270 aaPredicted RBP19.29■□□□□ 0.68
SKP2-201ENST00000274254 FSIP1Q8NA03 581 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 PNMA5Q96PV4 448 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 C16orf70Q9BSU1 422 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 GOLPH3LQ9H4A5 285 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 ZNF302Q9NR11 478 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 FAM13BQ9NYF5 915 aa19.29■□□□□ 0.68
SKP2-201ENST00000274254 A0A087X0B3 334 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 A0A1B0GVL5 298 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 POTEB3A0JP26 581 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 BACH1O14867 736 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 ZNF862O60290 1169 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 LYPLA2O95372 231 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 PFKFB1P16118 471 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 STAT5BP51692 787 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 KARSQ15046 597 aaKnown RBP19.28■□□□□ 0.68
SKP2-201ENST00000274254 TMEM119Q4V9L6 283 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 GNASQ5JWF2 1037 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 FAM160B1Q5W0V3 765 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 POTEBQ6S5H4 581 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 PLPPR4Q7Z2D5 763 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 TRIM50Q86XT4 487 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 TPH2Q8IWU9 490 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 C4orf19Q8IY42 314 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 DEFB118Q96PH6 123 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 SMARCAD1Q9H4L7 1026 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 AZI2Q9H6S1 392 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 ZSWIM4Q9H7M6 989 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 KCNH3Q9ULD8 1083 aa19.28■□□□□ 0.68
SKP2-201ENST00000274254 KPNA6O60684 536 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 NDUFA8P51970 172 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 LRRC41Q15345 812 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 TPRNQ4KMQ1 711 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 UTP14CQ5TAP6 766 aaKnown RBP19.27■□□□□ 0.68
SKP2-201ENST00000274254 POTEGQ6S5H5 508 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 RNF180Q86T96 592 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 KCTD17Q8N5Z5 321 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 CALML4Q96GE6 196 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 NT5C3AQ9H0P0 336 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 CCDC39Q9UFE4 941 aa19.27■□□□□ 0.68
SKP2-201ENST00000274254 DDX11L8A8MPP1 907 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 DKC1O60832 514 aaKnown RBP eCLIP19.26■□□□□ 0.67
SKP2-201ENST00000274254 STBD1O95210 358 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 F2P00734 622 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 GJB1P08034 283 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 ZNF286BP0CG31 522 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 PLCG1P19174 1290 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 ATP4AP20648 1035 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 SLC26A2P50443 739 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 PURAQ00577 322 aaKnown RBP19.26■□□□□ 0.67
SKP2-201ENST00000274254 PDXDC2PQ6P474 469 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 LRRC15Q8TF66 581 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 GLG1Q92896 1179 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 DDX19AQ9NUU7 478 aaKnown RBP19.26■□□□□ 0.67
SKP2-201ENST00000274254 OGDHLQ9ULD0 1010 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 KIAA1024Q9UPX6 916 aa19.26■□□□□ 0.67
SKP2-201ENST00000274254 KIAA0100Q14667 2235 aaKnown RBP19.26■□□□□ 0.67
SKP2-201ENST00000274254 ZEB2O60315 1214 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 ZRSR1Q15695 479 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 E2F4Q16254 413 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 NAALADL2Q58DX5 795 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 CCDC73Q6ZRK6 1079 aa19.25■□□□□ 0.67
SKP2-201ENST00000274254 PCSK9Q8NBP7 692 aaKnown RBP19.25■□□□□ 0.67
SKP2-201ENST00000274254 ENGASEQ8NFI3 743 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms