RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 ITGB5P18084 799 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 RXRAP19793 462 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 MGAT3Q09327 533 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 IKBKEQ14164 716 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 RAB11FIP4Q86YS3 637 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 MYOCDQ8IZQ8 938 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.34□□□□□ -0.75
TPM3-201ENST00000271850 LMBR1Q8WVP7 490 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 TOP1MTQ969P6 601 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 SPZ1Q9BXG8 430 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 MLXIPQ9HAP2 919 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 LMCD1Q9NZU5 365 aa10.34□□□□□ -0.75
TPM3-201ENST00000271850 GSTTP1A0A1W2PQM5 241 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 FIBPO43427 364 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 EFCAB14O75071 495 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 TRDNQ13061 729 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 UBE2SQ16763 222 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 FAM26DQ5JW98 314 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 MARCH8Q5T0T0 291 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 PCNX4Q63HM2 1172 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 TYW1BQ6NUM6 668 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 LINC01599Q8WXQ3 324 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 PCYT2Q99447 389 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 MAP3K14Q99558 947 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 UBE2ZQ9H832 354 aaPredicted RBP10.33□□□□□ -0.76
TPM3-201ENST00000271850 EMSYQ7Z589 1322 aa10.33□□□□□ -0.76
TPM3-201ENST00000271850 NLRC5Q86WI3 1866 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 PRC1O43663 620 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 STAM2O75886 525 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 DDAH1O94760 285 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 IL9P15248 144 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 SP4Q02446 784 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 NEDD9Q14511 834 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 COL19A1Q14993 1142 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 AAK1Q2M2I8 961 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 EPC2Q52LR7 807 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 UTP14CQ5TAP6 766 aaKnown RBP10.32□□□□□ -0.76
TPM3-201ENST00000271850 CATIPQ7Z7H3 387 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 RALYLQ86SE5 291 aaKnown RBP10.32□□□□□ -0.76
TPM3-201ENST00000271850 LAPTM4BQ86VI4 370 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 SENP7Q9BQF6 1050 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 LRFN3Q9BTN0 628 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 USP26Q9BXU7 913 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 LRRC2Q9BYS8 371 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 EHMT1Q9H9B1 1298 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 INSL6Q9Y581 213 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 UBIAD1Q9Y5Z9 338 aa10.32□□□□□ -0.76
TPM3-201ENST00000271850 TRIOO75962 3097 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 MBLAC1A4D2B0 266 aaPredicted RBP10.31□□□□□ -0.76
TPM3-201ENST00000271850 FAM86C2PA6NEL3 165 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 NOP56O00567 594 aaKnown RBP10.31□□□□□ -0.76
TPM3-201ENST00000271850 SLC27A2O14975 620 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 ADAMTS3O15072 1205 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 CAND2O75155 1236 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 AMHP03971 560 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 SMARCA1P28370 1054 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 TCF7P36402 384 aaPredicted RBP10.31□□□□□ -0.76
TPM3-201ENST00000271850 ARHGAP4P98171 946 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 KCNC4Q03721 635 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 LPIN1Q14693 890 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 LAPTM4AQ15012 233 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 NECTIN1Q15223 517 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 GNPTABQ3T906 1256 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 LEXMQ3ZCV2 418 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 CRIPAKQ8N1N5 446 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 IL27Q8NEV9 243 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 CYP2W1Q8TAV3 490 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 NEK9Q8TD19 979 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 RUFY2Q8WXA3 655 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 WDFY4Q6ZS81 3184 aa10.31□□□□□ -0.76
TPM3-201ENST00000271850 RALGAPA2Q2PPJ7 1873 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 ERICH2A1L162 156 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 H3BNC9 293 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 UPP2O95045 317 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 GHRP10912 638 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 KCNA5P22460 613 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 MARK3P27448 753 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 FUT2Q10981 343 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 TCEAL5Q5H9L2 206 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 TMTC3Q6ZXV5 915 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 RPAINQ86UA6 219 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 RTN4RL1Q86UN2 441 aaPredicted RBP10.3□□□□□ -0.76
TPM3-201ENST00000271850 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 SEPT8Q92599 483 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 GPRASP2Q96D09 838 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 MRPL38Q96DV4 380 aaKnown RBP10.3□□□□□ -0.76
TPM3-201ENST00000271850 RRP36Q96EU6 259 aaKnown RBP10.3□□□□□ -0.76
TPM3-201ENST00000271850 PGBD1Q96JS3 809 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 MTA3Q9BTC8 594 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 IFIH1Q9BYX4 1025 aaKnown RBP10.3□□□□□ -0.76
TPM3-201ENST00000271850 AGO3Q9H9G7 860 aaKnown RBP10.3□□□□□ -0.76
TPM3-201ENST00000271850 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 CNTNAP5Q8WYK1 1306 aa10.3□□□□□ -0.76
TPM3-201ENST00000271850 TTC3P53804 2025 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 KIAA1671Q9BY89 1806 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 H3BQ06 376 aaPredicted RBP10.29□□□□□ -0.76
TPM3-201ENST00000271850 LTBRP36941 435 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 PLA2G5P39877 138 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 LIFRP42702 1097 aa10.29□□□□□ -0.76
TPM3-201ENST00000271850 CAMK1Q14012 370 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms