RNA–Protein interactions for RNA: ENST00000265641.9

CPT1A-201, Transcript of carnitine palmitoyltransferase 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPT1A, Length 5,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-201ENST00000265641 E2F6O75461 281 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 CHRNA3P32297 505 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 ARFIP2P53365 341 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 PSMC1P62191 440 aaKnown RBP11.52□□□□□ -0.57
CPT1A-201ENST00000265641 MMEL1Q495T6 779 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 APOA5Q6Q788 366 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 TRMT1LQ7Z2T5 733 aaKnown RBP11.52□□□□□ -0.57
CPT1A-201ENST00000265641 SRRM1Q8IYB3 904 aaKnown RBP11.52□□□□□ -0.57
CPT1A-201ENST00000265641 CYTH2Q99418 400 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 MCM8Q9UJA3 840 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 ATP11BQ9Y2G3 1177 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 RFX7Q2KHR2 1363 aa11.52□□□□□ -0.57
CPT1A-201ENST00000265641 KRT81Q14533 505 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 TBCCQ15814 346 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 CEP55Q53EZ4 464 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 WASHC2DQ5SRD0 308 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 LONP2Q86WA8 852 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 SMYD4Q8IYR2 804 aaPredicted RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 TMCO5AQ8N6Q1 288 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 PPWD1Q96BP3 646 aaKnown RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 POC1B-GALNT4F8VUJ3 575 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 HDLBPQ00341 1268 aaKnown RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 NELFCDQ8IXH7 590 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 ZNF594Q96JF6 807 aaPredicted RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 CCDC28BQ9BUN5 200 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 NRDE2Q9H7Z3 1164 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 LCMT1Q9UIC8 334 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 MED23Q9ULK4 1368 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 hCG_1642624A0A1W2PR95 340 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 IGF2BP3O00425 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 S100BP04271 92 aaPredicted RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 DCAF5Q96JK2 942 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 FAM161BQ96MY7 647 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 LGR6Q9HBX8 967 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 LRCH1Q9Y2L9 728 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 SOS2Q07890 1332 aaPredicted RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 MAP2K7O14733 419 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 LRRC63Q05C16 580 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 ZCWPW2Q504Y3 356 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 GRAMD1CQ8IYS0 662 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 TRIM63Q969Q1 353 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 SIKE1Q9BRV8 207 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 CCDC134Q9H6E4 229 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 RMI1Q9H9A7 625 aa11.51□□□□□ -0.57
CPT1A-201ENST00000265641 ZC3H13Q5T200 1668 aaKnown RBP11.51□□□□□ -0.57
CPT1A-201ENST00000265641 ATP7BP35670 1465 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 A0A1B0GTH6 734 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 H3BQF6 201 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 FMNL1O95466 1100 aaPredicted RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 TRPC1P48995 793 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 MRPS15P82914 257 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 CYP27A1Q02318 531 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 SGO2Q562F6 1265 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 RBM43Q6ZSC3 357 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 EGFL6Q8IUX8 553 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 NCKAP5LQ9HCH0 1330 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 FTCDO95954 541 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 PCP11498 1178 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 POLA2Q14181 598 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 RGS9BPQ6ZS82 235 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 TRMT10CQ7L0Y3 403 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 NUDCD3Q8IVD9 361 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 CEP19Q96LK0 163 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 RNPC3Q96LT9 517 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 TRPC5Q9UL62 973 aaPredicted RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 G3BP2Q9UN86 482 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 SNX5Q9Y5X3 404 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 PRDM1O75626 825 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 ABCB4P21439 1286 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 PGM1P36871 562 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 DSG1Q02413 1049 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 EXOC3L4Q17RC7 722 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 KLHL38Q2WGJ6 581 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 MYLK4Q86YV6 388 aaPredicted RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 REXO1L1PQ8IX06 675 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 SH3GL2Q99962 352 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 FBXL5Q9UKA1 691 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 BRAFP15056 766 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 SERPINB8P50452 374 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 ART3Q13508 389 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 CALCRLQ16602 461 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 POTEAQ6S8J7 498 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 GSPT2Q8IYD1 628 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 CAVIN3Q969G5 261 aa11.5□□□□□ -0.57
CPT1A-201ENST00000265641 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 CPSF1Q10570 1443 aaKnown RBP11.5□□□□□ -0.57
CPT1A-201ENST00000265641 ASAP2O43150 1006 aa11.49□□□□□ -0.57
CPT1A-201ENST00000265641 ATP1A1P05023 1023 aaKnown RBP11.49□□□□□ -0.57
CPT1A-201ENST00000265641 PRLRP16471 622 aa11.49□□□□□ -0.57
CPT1A-201ENST00000265641 RAP1GDS1P52306 607 aa11.49□□□□□ -0.57
CPT1A-201ENST00000265641 STAT4Q14765 748 aa11.49□□□□□ -0.57
CPT1A-201ENST00000265641 SYDE1Q6ZW31 735 aaPredicted RBP11.49□□□□□ -0.57
CPT1A-201ENST00000265641 PRPF31Q8WWY3 499 aaKnown RBP11.49□□□□□ -0.57
CPT1A-201ENST00000265641 CEP72Q9P209 647 aa11.49□□□□□ -0.57
CPT1A-201ENST00000265641 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms