RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 UNC45AQ9H3U1 944 aa9.54□□□□□ -0.88
ERCC8-201ENST00000265038 AZI2Q9H6S1 392 aa9.54□□□□□ -0.88
ERCC8-201ENST00000265038 NRCAMQ92823 1304 aa9.54□□□□□ -0.88
ERCC8-201ENST00000265038 RBAK-RBAKDNI3L0D1 243 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 PITPNM1O00562 1244 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 CCNT1O60563 726 aaKnown RBP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 GAS7O60861 476 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 IQCF3P0C7M6 154 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 GCFC2P16383 781 aaKnown RBP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 ATP4AP20648 1035 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 KRT76Q01546 638 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 BFSP2Q13515 415 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 GPNMBQ14956 572 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 TMEM240Q5SV17 173 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 MARCH8Q5T0T0 291 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 LRCH2Q5VUJ6 765 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 TRAF7Q6Q0C0 670 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 RETREG2Q8NC44 543 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 CAGE1Q8TC20 777 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 LMBR1Q8WVP7 490 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 HAS1Q92839 578 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 ATP6V0A1Q93050 837 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 TEKT3Q9BXF9 490 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 KCNMB3Q9NPA1 279 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 IL23AQ9NPF7 189 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 PCDHA10Q9Y5I2 948 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 KIF28PB7ZC32 967 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 SOX1O00570 391 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 BACH1O14867 736 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 GNAT1P11488 350 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 CKBP12277 381 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 INSRRP14616 1297 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 FXR1P51114 621 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 PPFIA1Q13136 1202 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 SAFBQ15424 915 aaKnown RBP eCLIP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 GRIK4Q16099 956 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 LRIT3Q3SXY7 679 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 ZNF365Q70YC5 407 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 FOXP1Q9H334 677 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
ERCC8-201ENST00000265038 MAFBQ9Y5Q3 323 aaPredicted RBP9.53□□□□□ -0.88
ERCC8-201ENST00000265038 PSAPP07602 524 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 SELPP16109 830 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 GJB2P29033 226 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 CUL4AQ13619 759 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 ZNF618Q5T7W0 954 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 FAM160B1Q5W0V3 765 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 PDXDC2PQ6P474 469 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 RUFY4Q6ZNE9 571 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 CCDC155Q8N6L0 562 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 ZBTB10Q96DT7 871 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 FAM20AQ96MK3 541 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 NAP1L4Q99733 375 aaKnown RBP9.52□□□□□ -0.89
ERCC8-201ENST00000265038 DISC1Q9NRI5 854 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 GABBR1Q9UBS5 961 aa9.52□□□□□ -0.89
ERCC8-201ENST00000265038 POTEB3A0JP26 581 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 MBLAC1A4D2B0 266 aaPredicted RBP9.51□□□□□ -0.89
ERCC8-201ENST00000265038 RRN3P2A6NIE6 340 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 WDR64B1ANS9 1081 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 TBX3O15119 743 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 CHMP2AO43633 222 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 FGBP02675 491 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 SLC26A2P50443 739 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 JAK3P52333 1124 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 IGBP1P78318 339 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 POTEBQ6S5H4 581 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 LRRC8DQ7L1W4 858 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 ATP8B4Q8TF62 1192 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 TRAPPC12Q8WVT3 735 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 TCEAL9Q9UHQ7 104 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 VAV3Q9UKW4 847 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 TRPC6Q9Y210 931 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 SAMM50Q9Y512 469 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 EML1O00423 815 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 ZNF862O60290 1169 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 HBP1O60381 514 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 ATP2B1P20020 1258 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 U2AF2P26368 475 aaKnown RBP eCLIP9.51□□□□□ -0.891e-6■■■■□ 25.1
ERCC8-201ENST00000265038 SFNP31947 248 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 RFC2P35250 354 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 THPOP40225 353 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 PPP2R5CQ13362 524 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 MBTPS1Q14703 1052 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 UGCGQ16739 394 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 RASIP1Q5U651 963 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 MIER3Q7Z3K6 550 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 DEFB128Q7Z7B8 93 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 RPUSD2Q8IZ73 545 aaKnown RBP9.51□□□□□ -0.89
ERCC8-201ENST00000265038 HERVK_113Q902F9 699 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 LRCH3Q96II8 777 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 RNPC3Q96LT9 517 aaKnown RBP9.51□□□□□ -0.89
ERCC8-201ENST00000265038 SMC3Q9UQE7 1217 aa9.51□□□□□ -0.89
ERCC8-201ENST00000265038 DNAH12Q6ZR08 3092 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 LTBP2Q14767 1821 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 ZBTB42B2RXF5 422 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 NBNO60934 754 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 SPIRE1Q08AE8 756 aa9.5□□□□□ -0.89
ERCC8-201ENST00000265038 PSRC1Q6PGN9 363 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms