RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 ANKRD13CQ8N6S4 541 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 SYMPKQ92797 1274 aaKnown RBP20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 HAS1Q92839 578 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 EPSTI1Q96J88 318 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 ACBD3Q9H3P7 528 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 KCNMB3Q9NPA1 279 aa20.95■□□□□ 0.95
COL4A3BP-201ENST00000261415 DOCK5Q9H7D0 1870 aa20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 HNRNPH1P31943 449 aaKnown RBP20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 PGM5Q15124 567 aa20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 GPRC5AQ8NFJ5 357 aa20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 PDCD2LQ9BRP1 358 aa20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 KCNH3Q9ULD8 1083 aa20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 DOCK3Q8IZD9 2030 aa20.95■□□□□ 0.94
COL4A3BP-201ENST00000261415 SYKP43405 635 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 ARHGEF16Q5VV41 709 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 PCNX4Q63HM2 1172 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 WDR81Q562E7 1941 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 KINO60870 393 aaKnown RBP20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 TECP42680 631 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 INHBEP58166 350 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 CEP55Q53EZ4 464 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 SHCBP1Q8NEM2 672 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 GIMAP7Q8NHV1 300 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 ETNPPLQ8TBG4 499 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 GJA10Q969M2 543 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 EPC1Q9H2F5 836 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 MROH8Q9H579 483 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 MORF4L1Q9UBU8 362 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 FAN1Q9Y2M0 1017 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 MRFAP1Q9Y605 127 aa20.94■□□□□ 0.94
COL4A3BP-201ENST00000261415 MARCH6O60337 910 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 ZNF202O95125 648 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 TMC6Q7Z403 805 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 FAM212AQ96EL1 285 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 PORCNQ9H237 461 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 TBX3O15119 743 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 FXR2P51116 673 aaKnown RBP eCLIP20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 MRPS9P82933 396 aaKnown RBP20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 TMEM266Q2M3C6 531 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 BEND6Q5SZJ8 279 aaPredicted RBP20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 IFNL1Q8IU54 200 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 NSUN6Q8TEA1 469 aaKnown RBP20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 UIMC1Q96RL1 719 aa20.93■□□□□ 0.94
COL4A3BP-201ENST00000261415 MGAMO43451 1857 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 CCNA1P78396 465 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 MCM6Q14566 821 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 CYP4F22Q6NT55 531 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 GBP6Q6ZN66 633 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 SLFN12Q8IYM2 578 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 IGSF22Q8N9C0 903 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 RNF217Q8TC41 542 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 SGSM3Q96HU1 749 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 AK8Q96MA6 479 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 MXRA8Q9BRK3 442 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 PP2D1A8MPX8 630 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 MSH4O15457 936 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 CDC25AP30304 524 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 SREBF2Q12772 1141 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 GRM1Q13255 1194 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 WDR78Q5VTH9 848 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 CNNM3Q8NE01 707 aa20.92■□□□□ 0.94
COL4A3BP-201ENST00000261415 MEIS1O00470 390 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 ITGB5P18084 799 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 CNTN2Q02246 1040 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 TAF1CQ15572 869 aaPredicted RBP20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 FAM110CQ1W6H9 321 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 AOPEPQ8N6M6 819 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 PDILTQ8N807 584 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 PCDHA12Q9UN75 941 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 ADGRA2Q96PE1 1338 aa20.91■□□□□ 0.94
COL4A3BP-201ENST00000261415 A0A087X0B3 334 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 POLR2DO15514 142 aaKnown RBP20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 MYCLP12524 364 aaPredicted RBP20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 DNERQ8NFT8 737 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 FAM20AQ96MK3 541 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 ZIC5Q96T25 663 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 MMP19Q99542 508 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 RAB34Q9BZG1 259 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 UBIAD1Q9Y5Z9 338 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 ASTN1O14525 1302 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 POTEMA6NI47 508 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 ANKRD65E5RJM6 399 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 NR3C2P08235 984 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 KCTD2Q14681 263 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 PPP2R5AQ15172 486 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 GBP3Q9H0R5 595 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 RAB21Q9UL25 225 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 ZNF236Q9UL36 1845 aa20.9■□□□□ 0.94
COL4A3BP-201ENST00000261415 TUBBP07437 444 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 CCND2P30279 289 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 APLP1P51693 650 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 PDIA5Q14554 519 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 C11orf91Q3C1V1 193 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 XRRA1Q6P2D8 792 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 NIPA1Q7RTP0 329 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 VSIG10LQ86VR7 867 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 FAM133AQ8N9E0 248 aa20.89■□□□□ 0.94
COL4A3BP-201ENST00000261415 BPIFA3Q9BQP9 254 aa20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms