RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 HERC5Q9UII4 1024 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 PLAGL2Q9UPG8 496 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 GOLGA6L7A0A1B0GV03 622 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ZNF263O14978 683 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 FGFR1OPO95684 399 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 EEF2P13639 858 aaKnown RBP11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 CCNE1P24864 410 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ELF1P32519 619 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 TXKP42681 527 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 TNNI2P48788 182 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 USP11P51784 963 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ASIC1P78348 528 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 SLC7A5Q01650 507 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 CYP27A1Q02318 531 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ABCB5Q2M3G0 1257 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 RTKN2Q8IZC4 609 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ATP6V1G3Q96LB4 118 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 NT5C3AQ9H0P0 336 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 SCN9AQ15858 1988 aa11.87□□□□□ -0.51
CHRNA1-201ENST00000261007 ARFGEF1Q9Y6D6 1849 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 DDTLA6NHG4 134 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 ZNF233A6NK53 670 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 USP17L10C9JJH3 530 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 ATP1A2P50993 1020 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 CDR1P51861 262 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 PMS1P54277 932 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 PDE4DQ08499 809 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 PSMD2Q13200 908 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 FKBP15Q5T1M5 1219 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 RBM26Q5T8P6 1007 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 LRIG3Q6UXM1 1119 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 UNC13DQ70J99 1090 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC13Q8IYE1 715 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 P2RX5Q93086 422 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC43Q96MW1 224 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 DUSP9Q99956 384 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 MMTAG2Q9BU76 263 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 DDX25Q9UHL0 483 aaKnown RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 HDAC9Q9UKV0 1011 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 MAPK8IP1Q9UQF2 711 aa11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 ATF5Q9Y2D1 282 aaPredicted RBP11.86□□□□□ -0.51
CHRNA1-201ENST00000261007 GRID2IPA4D2P6 1211 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 MARCH6O60337 910 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 FOSP01100 380 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 NF2P35240 595 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 TCP10Q12799 353 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 AOC3Q16853 763 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 RNF187Q5TA31 235 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 TTBK2Q6IQ55 1244 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 CLEC10AQ8IUN9 316 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 SH2D3CQ8N5H7 860 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 PIK3R5Q8WYR1 880 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 LARP4BQ92615 738 aaKnown RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 P3H4Q92791 437 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 AMNQ9BXJ7 453 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 ABCB11O95342 1321 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 MOCS3O95396 460 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 TDP2O95551 362 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 KRT14P02533 472 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 KIF11P52732 1056 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 GUCY1A3Q02108 690 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 GRB10Q13322 594 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 ITGB3BPQ13352 177 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 CDC37Q16543 378 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 QRICH1Q2TAL8 776 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 TMEM119Q4V9L6 283 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 CEP85LQ5SZL2 805 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 HYIQ5T013 277 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 KCTD16Q68DU8 428 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 NFRKBQ6P4R8 1299 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 ARHGAP27Q6ZUM4 889 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 KCTD1Q719H9 257 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 SLFN12Q8IYM2 578 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 SNX29Q8TEQ0 813 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 PCMTD1Q96MG8 357 aaPredicted RBP11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 PSMD1Q99460 953 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 MLXIPQ9HAP2 919 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 VEZTQ9HBM0 779 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 CD248Q9HCU0 757 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 SLC40A1Q9NP59 571 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 PCDHA1Q9Y5I3 950 aa11.85□□□□□ -0.51
CHRNA1-201ENST00000261007 CYP3A7-CYP3A51PA0A087WV96 503 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 TBX3O15119 743 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 SLC37A4O43826 429 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 CYP3A7P24462 503 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 CHRNA5P30532 468 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 MATR3P43243 847 aaKnown RBP eCLIP11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 SNCBQ16143 134 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 MIIPQ5JXC2 388 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 BTNL9Q6UXG8 535 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 CCDC121Q6ZUS5 278 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 SH3BP5LQ7L8J4 393 aa11.84□□□□□ -0.51
CHRNA1-201ENST00000261007 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms