RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 MRPL9Q9BYD2 267 aaKnown RBP7.27□□□□□ -1.25
PDGFRA-201ENST00000257290 CNNM1Q9NRU3 951 aa7.27□□□□□ -1.25
PDGFRA-201ENST00000257290 EHD2Q9NZN4 543 aa7.27□□□□□ -1.25
PDGFRA-201ENST00000257290 APOA1P02647 267 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CD53P19397 219 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 TKTP29401 623 aaKnown RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 RAB15P59190 212 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 WDR45BQ5MNZ6 344 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 BRSK2Q8IWQ3 736 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SCYL3Q8IZE3 742 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 RETREG2Q8NC44 543 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 HSPH1Q92598 858 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 NRBF2Q96F24 287 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 FARSBQ9NSD9 589 aaKnown RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 TELO2Q9Y4R8 837 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CCDC162PA2VCL2 907 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 TTLL13PA6NNM8 815 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 RGS16O15492 202 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SULT1B1O43704 296 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CALM1P0DP23 149 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CALM2P0DP24 149 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CALM3P0DP25 149 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 STX2P32856 288 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 HOXD12P35452 270 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 PLCD1P51178 756 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 ATN1P54259 1190 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 TUBA1CQ9BQE3 449 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 KPNA4O00629 521 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 GIPC1O14908 333 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SPAG7O75391 227 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 FOSP01100 380 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 RFC5P40937 340 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 FANCCQ00597 558 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 PTGISQ16647 500 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 WASHC4Q2M389 1173 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 NAA35Q5VZE5 725 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SMYD1Q8NB12 490 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CAPSLQ8WWF8 208 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 RUNDC3BQ96NL0 473 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CNPY3Q9BT09 278 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 C2orf49Q9BVC5 232 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 ASCC2Q9H1I8 757 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SESN1Q9Y6P5 492 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 PDLIM1O00151 329 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 FAM107AO95990 144 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 GCP02774 474 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 IL32P24001 234 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 CLEC17AQ6ZS10 378 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 AACSQ86V21 672 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 COG1Q8WTW3 980 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 EYA1Q99502 592 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 TUFT1Q9NNX1 390 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 GSTA1P08263 222 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SNRPA1P09661 255 aaKnown RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 PPIDQ08752 370 aaKnown RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 PPP1R15BQ5SWA1 713 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 SCUBE1Q8IWY4 988 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 NMD3Q96D46 503 aaKnown RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 MYD88Q99836 296 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 UBE2OQ9C0C9 1292 aaKnown RBP7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 LRCH1Q9Y2L9 728 aa7.26□□□□□ -1.25
PDGFRA-201ENST00000257290 ATXN2Q99700 1313 aaKnown RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ALKQ9UM73 1620 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 CSPG5O95196 566 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ENO2P09104 434 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 PPARGP37231 505 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 DNAJC3Q13217 504 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 VPS53Q5VIR6 699 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 DENND2CQ68D51 928 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 PPP4R3AQ6IN85 833 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 FRA10AC1Q70Z53 315 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 OTUD5Q96G74 571 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ZFYVE19Q96K21 471 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 AGAP3Q96P47 875 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 CEP44Q9C0F1 390 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SLC38A10Q9HBR0 1119 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ZNF277Q9NRM2 450 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 PENKP01210 267 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 UBTFL6P0CB48 400 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ESRRAP11474 423 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SCTRP47872 440 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ADRM1Q16186 407 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 PRR23CQ6ZRP0 262 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 TMTC1Q8IUR5 882 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 DEPTORQ8TB45 409 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 MKS1Q9NXB0 559 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 TOM1O60784 492 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SYF2O95926 243 aaKnown RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 CHEK2O96017 543 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ENDOUP21128 410 aaKnown RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 SPAG1Q07617 926 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 KRT80Q6KB66 452 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ARHGEF40Q8TER5 1519 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 INO80B-WBP1J3KQ70 363 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 ATF4P18848 351 aaPredicted RBP7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 NUP107P57740 925 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 CDR2Q01850 454 aa7.25□□□□□ -1.25
PDGFRA-201ENST00000257290 MYL5Q02045 173 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms